Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHD8Q9HCK8 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 KRT8P13-201ENST00000463294 1010 ntBASIC15.88■□□□□ 0.13
CHD8Q9HCK8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 BTNL10-201ENST00000595971 695 ntBASIC15.88■□□□□ 0.13
CHD8Q9HCK8 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHD8Q9HCK8 AC093525.8-201ENST00000624099 1342 ntBASIC15.88■□□□□ 0.13
CHD8Q9HCK8 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 RPL37AP1-201ENST00000412502 279 ntBASIC15.87■□□□□ 0.13
CHD8Q9HCK8 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 MIR8072-201ENST00000614241 80 ntBASIC15.87■□□□□ 0.13
CHD8Q9HCK8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 AC016027.1-202ENST00000607927 1699 ntBASIC15.87■□□□□ 0.13
CHD8Q9HCK8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
CHD8Q9HCK8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHD8Q9HCK8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms