Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 SLC25A1P2-201ENST00000430693 912 ntBASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 AL353719.1-201ENST00000566847 864 ntBASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 AC010240.3-201ENST00000607688 395 ntBASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 AC068418.2-201ENST00000577309 3703 ntBASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
SND1-IT1Q9HBX3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
SND1-IT1Q9HBX3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC11.65□□□□□ -0.55
SND1-IT1Q9HBX3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
SND1-IT1Q9HBX3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC11.65□□□□□ -0.55
SND1-IT1Q9HBX3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
SND1-IT1Q9HBX3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC11.65□□□□□ -0.55
SND1-IT1Q9HBX3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
SND1-IT1Q9HBX3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
SND1-IT1Q9HBX3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
SND1-IT1Q9HBX3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
SND1-IT1Q9HBX3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 PCDHB17P-201ENST00000539533 2393 ntBASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 AP005242.2-201ENST00000580065 1175 ntBASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 AL023803.3-201ENST00000615559 522 ntBASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 REXO1L10P-201ENST00000615707 1290 ntBASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 AL359736.2-201ENST00000621992 437 ntBASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 REXO1L12P-201ENST00000622156 912 ntBASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 AC009949.1-201ENST00000623048 1830 ntBASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms