Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 AC092053.1-201ENST00000605787 1936 ntBASIC16.57■□□□□ 0.24
BRF2Q9HAW0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 SIGLEC16-201ENST00000599858 1437 ntBASIC16.57■□□□□ 0.24
BRF2Q9HAW0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 AC099336.1-202ENST00000602961 463 ntBASIC16.57■□□□□ 0.24
BRF2Q9HAW0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 AC092119.3-201ENST00000612618 583 ntBASIC16.57■□□□□ 0.24
BRF2Q9HAW0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.57■□□□□ 0.24
BRF2Q9HAW0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 NKILA-202ENST00000614771 2598 ntBASIC16.57■□□□□ 0.24
BRF2Q9HAW0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 SPDYE21P-201ENST00000413323 827 ntBASIC16.56■□□□□ 0.24
BRF2Q9HAW0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 ACTG1P4-201ENST00000425123 1122 ntBASIC16.56■□□□□ 0.24
BRF2Q9HAW0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 ABCD1P5-201ENST00000445663 754 ntBASIC16.56■□□□□ 0.24
BRF2Q9HAW0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 MIR5100-201ENST00000579544 119 ntBASIC16.56■□□□□ 0.24
BRF2Q9HAW0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
BRF2Q9HAW0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 GPR89P-201ENST00000407924 1495 ntBASIC16.55■□□□□ 0.24
BRF2Q9HAW0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 KRT16P4-201ENST00000453883 522 ntBASIC16.55■□□□□ 0.24
BRF2Q9HAW0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 AC010331.1-201ENST00000611423 582 ntBASIC16.55■□□□□ 0.24
BRF2Q9HAW0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 AC073592.4-201ENST00000623827 446 ntBASIC16.55■□□□□ 0.24
BRF2Q9HAW0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.55■□□□□ 0.24
BRF2Q9HAW0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms