Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 AC107890.1-201ENST00000422478 521 ntBASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 RBPMS2P1-201ENST00000437762 623 ntBASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 UGT1A2P-201ENST00000454886 866 ntBASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 OARD1-208ENST00000469104 704 ntTSL 2 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.88■□□□□ 0.93
RTFDC1Q9BY42 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 SPDYE14P-201ENST00000442619 822 ntBASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 TSPY16P-201ENST00000449843 468 ntBASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 AC140878.1-201ENST00000565277 250 ntBASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 LINC01451-201ENST00000623792 534 ntBASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTFDC1Q9BY42 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 TERF1P3-201ENST00000505638 1227 ntBASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 AC026150.2-201ENST00000564693 1156 ntBASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 AC005412.3-201ENST00000580309 715 ntBASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 AL009183.1-201ENST00000603760 355 ntBASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 AL035252.4-201ENST00000624174 288 ntBASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 AL354751.1-201ENST00000412768 1863 ntBASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RTFDC1Q9BY42 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 AC063926.2-201ENST00000623766 1308 ntBASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTFDC1Q9BY42 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms