Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 AC116407.3-201ENST00000623905 1129 ntBASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 AC148477.5-201ENST00000625164 1645 ntBASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 AC092910.1-201ENST00000482027 1129 ntBASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 AL589182.2-201ENST00000619332 1049 ntBASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 MIR1199-201ENST00000621445 119 ntBASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 LINC01451-201ENST00000623792 534 ntBASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 NCF1C-201ENST00000438382 1427 ntBASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSBP3Q9BWW4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 AP000347.1-202ENST00000435868 847 ntBASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.47□□□□□ -0.09
SSBP3Q9BWW4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SSBP3Q9BWW4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP3Q9BWW4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms