Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 AC025062.2-201ENST00000605477 670 ntBASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 AL589182.2-201ENST00000619332 1049 ntBASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCM2Q9BSQ5 NCF1C-201ENST00000438382 1427 ntBASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 AL023806.1-201ENST00000603994 1649 ntBASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 AL773604.1-201ENST00000617417 272 ntBASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CCM2Q9BSQ5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 LINC00982-205ENST00000420957 435 ntBASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 AC018712.1-201ENST00000455767 687 ntBASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 AC139887.3-201ENST00000568585 713 ntBASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCM2Q9BSQ5 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CCM2Q9BSQ5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2Q9BSQ5 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2Q9BSQ5 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2Q9BSQ5 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2Q9BSQ5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.02■□□□□ 0.32
CCM2Q9BSQ5 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CCM2Q9BSQ5 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2Q9BSQ5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.02■□□□□ 0.32
CCM2Q9BSQ5 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2Q9BSQ5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2Q9BSQ5 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2Q9BSQ5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCM2Q9BSQ5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CCM2Q9BSQ5 AC116353.5-201ENST00000638148 1699 ntBASIC17.02■□□□□ 0.32
CCM2Q9BSQ5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.02■□□□□ 0.32
CCM2Q9BSQ5 RPS2P1-201ENST00000434010 821 ntBASIC17.02■□□□□ 0.32
CCM2Q9BSQ5 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms