Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.5■□□□□ 0.23
CGREF1Q99674 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CGREF1Q99674 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CGREF1Q99674 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CGREF1Q99674 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.5■□□□□ 0.23
CGREF1Q99674 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CGREF1Q99674 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CGREF1Q99674 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CGREF1Q99674 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.5■□□□□ 0.23
CGREF1Q99674 MYCLP1-201ENST00000372451 1075 ntBASIC16.5■□□□□ 0.23
CGREF1Q99674 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CGREF1Q99674 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.5■□□□□ 0.23
CGREF1Q99674 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CGREF1Q99674 STARP1-201ENST00000397973 869 ntBASIC16.5■□□□□ 0.23
CGREF1Q99674 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.5■□□□□ 0.23
CGREF1Q99674 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.5■□□□□ 0.23
CGREF1Q99674 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.5■□□□□ 0.23
CGREF1Q99674 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CGREF1Q99674 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CGREF1Q99674 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.5■□□□□ 0.23
CGREF1Q99674 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.5■□□□□ 0.23
CGREF1Q99674 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CGREF1Q99674 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CGREF1Q99674 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.5■□□□□ 0.23
CGREF1Q99674 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CGREF1Q99674 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CGREF1Q99674 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CGREF1Q99674 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CGREF1Q99674 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CGREF1Q99674 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CGREF1Q99674 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.49■□□□□ 0.23
CGREF1Q99674 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGREF1Q99674 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGREF1Q99674 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.49■□□□□ 0.23
CGREF1Q99674 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.49■□□□□ 0.23
CGREF1Q99674 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGREF1Q99674 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CGREF1Q99674 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGREF1Q99674 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CGREF1Q99674 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGREF1Q99674 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGREF1Q99674 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CGREF1Q99674 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGREF1Q99674 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGREF1Q99674 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CGREF1Q99674 MIR662-201ENST00000384847 95 ntBASIC16.49■□□□□ 0.23
CGREF1Q99674 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGREF1Q99674 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.49■□□□□ 0.23
CGREF1Q99674 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CGREF1Q99674 AC124947.2-201ENST00000547118 1133 ntBASIC16.49■□□□□ 0.23
CGREF1Q99674 ZNF444P1-201ENST00000559497 298 ntBASIC16.49■□□□□ 0.23
CGREF1Q99674 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGREF1Q99674 GPR32P1-201ENST00000601788 811 ntBASIC16.49■□□□□ 0.23
CGREF1Q99674 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.49■□□□□ 0.23
CGREF1Q99674 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CGREF1Q99674 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CGREF1Q99674 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CGREF1Q99674 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGREF1Q99674 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CGREF1Q99674 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGREF1Q99674 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGREF1Q99674 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CGREF1Q99674 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CGREF1Q99674 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CGREF1Q99674 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGREF1Q99674 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CGREF1Q99674 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.48■□□□□ 0.23
CGREF1Q99674 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CGREF1Q99674 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CGREF1Q99674 AC092068.3-201ENST00000587894 2016 ntBASIC16.48■□□□□ 0.23
CGREF1Q99674 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CGREF1Q99674 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CGREF1Q99674 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CGREF1Q99674 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
CGREF1Q99674 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CGREF1Q99674 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CGREF1Q99674 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CGREF1Q99674 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.48■□□□□ 0.23
CGREF1Q99674 AC092597.1-201ENST00000487352 616 ntBASIC16.48■□□□□ 0.23
CGREF1Q99674 COX11P1-201ENST00000489116 835 ntBASIC16.48■□□□□ 0.23
CGREF1Q99674 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CGREF1Q99674 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CGREF1Q99674 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.48■□□□□ 0.23
CGREF1Q99674 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.48■□□□□ 0.23
CGREF1Q99674 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.48■□□□□ 0.23
CGREF1Q99674 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CGREF1Q99674 TMEM191A-211ENST00000637163 1067 ntBASIC16.48■□□□□ 0.23
CGREF1Q99674 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CGREF1Q99674 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CGREF1Q99674 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CGREF1Q99674 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CGREF1Q99674 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.48■□□□□ 0.23
CGREF1Q99674 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.48■□□□□ 0.23
CGREF1Q99674 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CGREF1Q99674 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CGREF1Q99674 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.48■□□□□ 0.23
CGREF1Q99674 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.48■□□□□ 0.23
CGREF1Q99674 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CGREF1Q99674 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.48■□□□□ 0.23
CGREF1Q99674 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms