Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA3Q99618 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA3Q99618 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA3Q99618 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA3Q99618 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA3Q99618 MIR346-201ENST00000362234 95 ntBASIC17.86■□□□□ 0.45
CDCA3Q99618 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.86■□□□□ 0.45
CDCA3Q99618 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA3Q99618 PIN1P1-201ENST00000412108 996 ntBASIC17.86■□□□□ 0.45
CDCA3Q99618 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CDCA3Q99618 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.86■□□□□ 0.45
CDCA3Q99618 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.86■□□□□ 0.45
CDCA3Q99618 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.86■□□□□ 0.45
CDCA3Q99618 AP005018.1-201ENST00000525475 301 ntBASIC17.86■□□□□ 0.45
CDCA3Q99618 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.86■□□□□ 0.45
CDCA3Q99618 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.86■□□□□ 0.45
CDCA3Q99618 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.86■□□□□ 0.45
CDCA3Q99618 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA3Q99618 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.86■□□□□ 0.45
CDCA3Q99618 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA3Q99618 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA3Q99618 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA3Q99618 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA3Q99618 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.86■□□□□ 0.45
CDCA3Q99618 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA3Q99618 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA3Q99618 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDCA3Q99618 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.85■□□□□ 0.45
CDCA3Q99618 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDCA3Q99618 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDCA3Q99618 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CDCA3Q99618 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDCA3Q99618 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDCA3Q99618 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDCA3Q99618 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CDCA3Q99618 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.85■□□□□ 0.45
CDCA3Q99618 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CDCA3Q99618 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDCA3Q99618 AC092580.3-201ENST00000430932 139 ntBASIC17.85■□□□□ 0.45
CDCA3Q99618 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.85■□□□□ 0.45
CDCA3Q99618 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.85■□□□□ 0.45
CDCA3Q99618 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.85■□□□□ 0.45
CDCA3Q99618 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.85■□□□□ 0.45
CDCA3Q99618 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CDCA3Q99618 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CDCA3Q99618 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.85■□□□□ 0.45
CDCA3Q99618 AC027307.2-201ENST00000591252 911 ntBASIC17.85■□□□□ 0.45
CDCA3Q99618 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.85■□□□□ 0.45
CDCA3Q99618 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDCA3Q99618 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.85■□□□□ 0.45
CDCA3Q99618 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CDCA3Q99618 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CDCA3Q99618 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CDCA3Q99618 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.84■□□□□ 0.45
CDCA3Q99618 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.84■□□□□ 0.45
CDCA3Q99618 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDCA3Q99618 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.84■□□□□ 0.45
CDCA3Q99618 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CDCA3Q99618 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDCA3Q99618 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.84■□□□□ 0.45
CDCA3Q99618 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDCA3Q99618 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDCA3Q99618 AC004890.2-204ENST00000481968 304 ntBASIC17.84■□□□□ 0.45
CDCA3Q99618 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.84■□□□□ 0.45
CDCA3Q99618 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDCA3Q99618 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.84■□□□□ 0.45
CDCA3Q99618 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.84■□□□□ 0.45
CDCA3Q99618 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDCA3Q99618 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.84■□□□□ 0.45
CDCA3Q99618 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.84■□□□□ 0.45
CDCA3Q99618 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CDCA3Q99618 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDCA3Q99618 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDCA3Q99618 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.84■□□□□ 0.45
CDCA3Q99618 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CDCA3Q99618 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDCA3Q99618 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDCA3Q99618 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CDCA3Q99618 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDCA3Q99618 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.83■□□□□ 0.45
CDCA3Q99618 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CDCA3Q99618 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDCA3Q99618 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDCA3Q99618 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CDCA3Q99618 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDCA3Q99618 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
CDCA3Q99618 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.83■□□□□ 0.44
CDCA3Q99618 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.83■□□□□ 0.44
CDCA3Q99618 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.83■□□□□ 0.44
CDCA3Q99618 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.83■□□□□ 0.44
CDCA3Q99618 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.83■□□□□ 0.44
CDCA3Q99618 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.83■□□□□ 0.44
CDCA3Q99618 AL031055.1-201ENST00000606362 631 ntBASIC17.83■□□□□ 0.44
CDCA3Q99618 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CDCA3Q99618 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDCA3Q99618 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDCA3Q99618 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDCA3Q99618 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.83■□□□□ 0.44
CDCA3Q99618 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.83■□□□□ 0.44
CDCA3Q99618 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms