Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 MIR4751-201ENST00000578027 74 ntBASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 AC140113.2-201ENST00000604370 208 ntBASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDK5RAP1Q96SZ6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 KRT18P3-201ENST00000451602 1288 ntBASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.94■□□□□ 0.46
CDK5RAP1Q96SZ6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 VN2R19P-201ENST00000442399 1052 ntBASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDK5RAP1Q96SZ6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDK5RAP1Q96SZ6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms