Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP2Q96SN8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 AC124947.2-201ENST00000547118 1133 ntBASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 AL645728.2-201ENST00000641974 660 ntBASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 TIMM8BP1-201ENST00000452384 211 ntBASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 MIR4515-201ENST00000584082 81 ntBASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CDK5RAP2Q96SN8 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 AC007613.1-201ENST00000572811 2597 ntBASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 TFAMP1-201ENST00000412727 736 ntBASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 RARRES2P8-201ENST00000566335 367 ntBASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP2Q96SN8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.14■□□□□ 0.82
CDK5RAP2Q96SN8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.14■□□□□ 0.82
CDK5RAP2Q96SN8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
CDK5RAP2Q96SN8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.14■□□□□ 0.82
CDK5RAP2Q96SN8 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
CDK5RAP2Q96SN8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP2Q96SN8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP2Q96SN8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP2Q96SN8 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP2Q96SN8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.14■□□□□ 0.81
CDK5RAP2Q96SN8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP2Q96SN8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.14■□□□□ 0.81
CDK5RAP2Q96SN8 AC093512.1-201ENST00000617969 520 ntBASIC20.14■□□□□ 0.81
CDK5RAP2Q96SN8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP2Q96SN8 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.14■□□□□ 0.81
CDK5RAP2Q96SN8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP2Q96SN8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.14■□□□□ 0.81
CDK5RAP2Q96SN8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP2Q96SN8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP2Q96SN8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.14■□□□□ 0.81
CDK5RAP2Q96SN8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
CDK5RAP2Q96SN8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP2Q96SN8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP2Q96SN8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CDK5RAP2Q96SN8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP2Q96SN8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CDK5RAP2Q96SN8 HCG4-201ENST00000418983 998 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms