Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AK4P3-201ENST00000418260 669 ntBASIC18.35■□□□□ 0.53
CALR3Q96L12 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CALR3Q96L12 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALR3Q96L12 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.35■□□□□ 0.53
CALR3Q96L12 AC092647.4-201ENST00000457211 535 ntBASIC18.35■□□□□ 0.53
CALR3Q96L12 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.35■□□□□ 0.53
CALR3Q96L12 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.35■□□□□ 0.53
CALR3Q96L12 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.35■□□□□ 0.53
CALR3Q96L12 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CALR3Q96L12 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.35■□□□□ 0.53
CALR3Q96L12 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CALR3Q96L12 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALR3Q96L12 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CALR3Q96L12 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALR3Q96L12 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.35■□□□□ 0.53
CALR3Q96L12 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALR3Q96L12 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CALR3Q96L12 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALR3Q96L12 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CALR3Q96L12 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CALR3Q96L12 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALR3Q96L12 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALR3Q96L12 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALR3Q96L12 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CALR3Q96L12 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CALR3Q96L12 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALR3Q96L12 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CALR3Q96L12 AL162727.3-201ENST00000635661 2787 ntBASIC18.34■□□□□ 0.53
CALR3Q96L12 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.34■□□□□ 0.53
CALR3Q96L12 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.34■□□□□ 0.53
CALR3Q96L12 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CALR3Q96L12 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALR3Q96L12 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALR3Q96L12 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.34■□□□□ 0.53
CALR3Q96L12 AC246785.2-201ENST00000432512 513 ntBASIC18.34■□□□□ 0.53
CALR3Q96L12 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALR3Q96L12 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CALR3Q96L12 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CALR3Q96L12 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALR3Q96L12 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALR3Q96L12 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALR3Q96L12 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALR3Q96L12 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CALR3Q96L12 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALR3Q96L12 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.34■□□□□ 0.53
CALR3Q96L12 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALR3Q96L12 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.34■□□□□ 0.53
CALR3Q96L12 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALR3Q96L12 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CALR3Q96L12 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.33■□□□□ 0.53
CALR3Q96L12 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CALR3Q96L12 AL353593.2-201ENST00000602529 1483 ntBASIC18.33■□□□□ 0.53
CALR3Q96L12 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CALR3Q96L12 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CALR3Q96L12 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CALR3Q96L12 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CALR3Q96L12 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.33■□□□□ 0.53
CALR3Q96L12 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.33■□□□□ 0.53
CALR3Q96L12 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.33■□□□□ 0.53
CALR3Q96L12 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.33■□□□□ 0.53
CALR3Q96L12 AL603756.1-201ENST00000606511 2163 ntBASIC18.33■□□□□ 0.52
CALR3Q96L12 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CALR3Q96L12 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALR3Q96L12 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALR3Q96L12 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALR3Q96L12 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CALR3Q96L12 AC005521.1-201ENST00000393351 872 ntBASIC18.33■□□□□ 0.52
CALR3Q96L12 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CALR3Q96L12 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CALR3Q96L12 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.33■□□□□ 0.52
CALR3Q96L12 AP002490.2-201ENST00000524791 560 ntBASIC18.33■□□□□ 0.52
CALR3Q96L12 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.33■□□□□ 0.52
CALR3Q96L12 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.33■□□□□ 0.52
CALR3Q96L12 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALR3Q96L12 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CALR3Q96L12 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
CALR3Q96L12 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.33■□□□□ 0.52
CALR3Q96L12 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALR3Q96L12 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CALR3Q96L12 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALR3Q96L12 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALR3Q96L12 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CALR3Q96L12 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CALR3Q96L12 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CALR3Q96L12 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALR3Q96L12 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALR3Q96L12 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CALR3Q96L12 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CALR3Q96L12 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CALR3Q96L12 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CALR3Q96L12 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CALR3Q96L12 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CALR3Q96L12 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CALR3Q96L12 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CALR3Q96L12 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CALR3Q96L12 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CALR3Q96L12 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.32■□□□□ 0.52
CALR3Q96L12 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.32■□□□□ 0.52
CALR3Q96L12 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CALR3Q96L12 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms