Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SUSD3Q96L08 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SUSD3Q96L08 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUSD3Q96L08 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.24■□□□□ 0.51
SUSD3Q96L08 BCL2-203ENST00000589955 5011 ntBASIC18.24■□□□□ 0.51
SUSD3Q96L08 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.24■□□□□ 0.51
SUSD3Q96L08 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.24■□□□□ 0.51
SUSD3Q96L08 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SUSD3Q96L08 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUSD3Q96L08 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.24■□□□□ 0.51
SUSD3Q96L08 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SUSD3Q96L08 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.24■□□□□ 0.51
SUSD3Q96L08 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.24■□□□□ 0.51
SUSD3Q96L08 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.24■□□□□ 0.51
SUSD3Q96L08 AL513480.1-201ENST00000451731 511 ntBASIC18.24■□□□□ 0.51
SUSD3Q96L08 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.24■□□□□ 0.51
SUSD3Q96L08 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.24■□□□□ 0.51
SUSD3Q96L08 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUSD3Q96L08 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.24■□□□□ 0.51
SUSD3Q96L08 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SUSD3Q96L08 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUSD3Q96L08 EGFEM1P-202ENST00000431685 1563 ntBASIC18.24■□□□□ 0.51
SUSD3Q96L08 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUSD3Q96L08 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUSD3Q96L08 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 NOC2LP2-201ENST00000407594 1944 ntBASIC18.23■□□□□ 0.51
SUSD3Q96L08 ELL2P1-201ENST00000413990 1906 ntBASIC18.23■□□□□ 0.51
SUSD3Q96L08 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
SUSD3Q96L08 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SUSD3Q96L08 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SUSD3Q96L08 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SUSD3Q96L08 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SUSD3Q96L08 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SUSD3Q96L08 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SUSD3Q96L08 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SUSD3Q96L08 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SUSD3Q96L08 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 DNAJB3-202ENST00000449667 1266 ntBASIC18.23■□□□□ 0.51
SUSD3Q96L08 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SUSD3Q96L08 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SUSD3Q96L08 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SUSD3Q96L08 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SUSD3Q96L08 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SUSD3Q96L08 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SUSD3Q96L08 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SUSD3Q96L08 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SUSD3Q96L08 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SUSD3Q96L08 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SUSD3Q96L08 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SUSD3Q96L08 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SUSD3Q96L08 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SUSD3Q96L08 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.22■□□□□ 0.51
SUSD3Q96L08 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SUSD3Q96L08 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SUSD3Q96L08 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SUSD3Q96L08 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.22■□□□□ 0.51
SUSD3Q96L08 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SUSD3Q96L08 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.22■□□□□ 0.51
SUSD3Q96L08 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.22■□□□□ 0.51
SUSD3Q96L08 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.22■□□□□ 0.51
SUSD3Q96L08 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.22■□□□□ 0.51
SUSD3Q96L08 AC068137.2-201ENST00000605408 478 ntBASIC18.22■□□□□ 0.51
SUSD3Q96L08 REXO1L3P-201ENST00000622202 1288 ntBASIC18.22■□□□□ 0.51
SUSD3Q96L08 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.22■□□□□ 0.51
SUSD3Q96L08 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SUSD3Q96L08 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SUSD3Q96L08 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SUSD3Q96L08 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SUSD3Q96L08 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SUSD3Q96L08 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.22■□□□□ 0.51
SUSD3Q96L08 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.22■□□□□ 0.51
SUSD3Q96L08 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SUSD3Q96L08 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SUSD3Q96L08 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SUSD3Q96L08 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SUSD3Q96L08 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SUSD3Q96L08 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.22■□□□□ 0.51
SUSD3Q96L08 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.22■□□□□ 0.51
SUSD3Q96L08 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SUSD3Q96L08 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms