Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCC1Q92922 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCC1Q92922 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC21.98■■□□□ 1.11
SMARCC1Q92922 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCC1Q92922 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCC1Q92922 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCC1Q92922 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SMARCC1Q92922 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMARCC1Q92922 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.98■■□□□ 1.11
SMARCC1Q92922 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCC1Q92922 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCC1Q92922 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCC1Q92922 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCC1Q92922 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCC1Q92922 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCC1Q92922 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.97■■□□□ 1.11
SMARCC1Q92922 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
SMARCC1Q92922 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCC1Q92922 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCC1Q92922 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
SMARCC1Q92922 GSAP-205ENST00000430584 600 ntTSL 5 BASIC21.97■■□□□ 1.11
SMARCC1Q92922 AC069120.2-201ENST00000524091 540 ntBASIC21.97■■□□□ 1.11
SMARCC1Q92922 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.97■■□□□ 1.11
SMARCC1Q92922 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC21.97■■□□□ 1.11
SMARCC1Q92922 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC21.97■■□□□ 1.11
SMARCC1Q92922 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.97■■□□□ 1.11
SMARCC1Q92922 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SMARCC1Q92922 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.97■■□□□ 1.11
SMARCC1Q92922 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SMARCC1Q92922 HNRNPRP1-201ENST00000453465 1695 ntBASIC21.97■■□□□ 1.11
SMARCC1Q92922 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCC1Q92922 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCC1Q92922 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SMARCC1Q92922 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.97■■□□□ 1.11
SMARCC1Q92922 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCC1Q92922 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.96■■□□□ 1.11
SMARCC1Q92922 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCC1Q92922 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCC1Q92922 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SMARCC1Q92922 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SMARCC1Q92922 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SMARCC1Q92922 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCC1Q92922 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
SMARCC1Q92922 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCC1Q92922 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC21.96■■□□□ 1.11
SMARCC1Q92922 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.96■■□□□ 1.11
SMARCC1Q92922 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCC1Q92922 AC097493.3-201ENST00000509725 367 ntBASIC21.96■■□□□ 1.11
SMARCC1Q92922 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC21.96■■□□□ 1.11
SMARCC1Q92922 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCC1Q92922 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.96■■□□□ 1.11
SMARCC1Q92922 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.96■■□□□ 1.11
SMARCC1Q92922 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC21.96■■□□□ 1.11
SMARCC1Q92922 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCC1Q92922 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCC1Q92922 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCC1Q92922 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SMARCC1Q92922 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SMARCC1Q92922 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC1Q92922 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC1Q92922 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC1Q92922 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
SMARCC1Q92922 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC1Q92922 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.95■■□□□ 1.1
SMARCC1Q92922 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC1Q92922 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC1Q92922 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.95■■□□□ 1.1
SMARCC1Q92922 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.95■■□□□ 1.1
SMARCC1Q92922 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC1Q92922 COQ6-210ENST00000554920 649 ntTSL 3 BASIC21.95■■□□□ 1.1
SMARCC1Q92922 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC21.95■■□□□ 1.1
SMARCC1Q92922 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC1Q92922 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC1Q92922 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SMARCC1Q92922 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
SMARCC1Q92922 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.95■■□□□ 1.1
SMARCC1Q92922 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC1Q92922 WASH6P-202ENST00000359512 1437 ntBASIC21.95■■□□□ 1.1
SMARCC1Q92922 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC21.95■■□□□ 1.1
SMARCC1Q92922 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC21.95■■□□□ 1.1
SMARCC1Q92922 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SMARCC1Q92922 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC1Q92922 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMARCC1Q92922 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.94■■□□□ 1.1
SMARCC1Q92922 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.94■■□□□ 1.1
SMARCC1Q92922 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
SMARCC1Q92922 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SMARCC1Q92922 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SMARCC1Q92922 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCC1Q92922 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
SMARCC1Q92922 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCC1Q92922 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCC1Q92922 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC21.94■■□□□ 1.1
SMARCC1Q92922 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC21.94■■□□□ 1.1
SMARCC1Q92922 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.94■■□□□ 1.1
SMARCC1Q92922 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMARCC1Q92922 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC21.94■■□□□ 1.1
SMARCC1Q92922 SSH2-211ENST00000590153 570 ntTSL 4 BASIC21.94■■□□□ 1.1
SMARCC1Q92922 CECR7-204ENST00000609932 568 ntTSL 2 BASIC21.94■■□□□ 1.1
SMARCC1Q92922 MIR6080-201ENST00000617359 66 ntBASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms