Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP6NLQ92738 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP6NLQ92738 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
USP6NLQ92738 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
USP6NLQ92738 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP6NLQ92738 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.51■□□□□ 0.71
USP6NLQ92738 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP6NLQ92738 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
USP6NLQ92738 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
USP6NLQ92738 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP6NLQ92738 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.51■□□□□ 0.71
USP6NLQ92738 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP6NLQ92738 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.51■□□□□ 0.71
USP6NLQ92738 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
USP6NLQ92738 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6NLQ92738 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6NLQ92738 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6NLQ92738 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.5■□□□□ 0.71
USP6NLQ92738 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.5■□□□□ 0.71
USP6NLQ92738 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6NLQ92738 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6NLQ92738 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.5■□□□□ 0.71
USP6NLQ92738 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6NLQ92738 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6NLQ92738 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.5■□□□□ 0.71
USP6NLQ92738 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP6NLQ92738 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6NLQ92738 RN7SL589P-201ENST00000481268 310 ntBASIC19.5■□□□□ 0.71
USP6NLQ92738 INGX-202ENST00000489074 768 ntBASIC19.5■□□□□ 0.71
USP6NLQ92738 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6NLQ92738 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.5■□□□□ 0.71
USP6NLQ92738 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.5■□□□□ 0.71
USP6NLQ92738 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.5■□□□□ 0.71
USP6NLQ92738 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
USP6NLQ92738 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6NLQ92738 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP6NLQ92738 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6NLQ92738 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
USP6NLQ92738 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6NLQ92738 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP6NLQ92738 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6NLQ92738 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6NLQ92738 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6NLQ92738 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.5■□□□□ 0.71
USP6NLQ92738 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP6NLQ92738 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP6NLQ92738 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
USP6NLQ92738 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.5■□□□□ 0.71
USP6NLQ92738 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP6NLQ92738 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
USP6NLQ92738 AKAP8P1-201ENST00000434743 1349 ntBASIC19.5■□□□□ 0.71
USP6NLQ92738 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP6NLQ92738 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6NLQ92738 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6NLQ92738 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.49■□□□□ 0.71
USP6NLQ92738 REXO1L9P-201ENST00000604264 2108 ntBASIC19.49■□□□□ 0.71
USP6NLQ92738 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
USP6NLQ92738 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6NLQ92738 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP6NLQ92738 NEFHP1-201ENST00000412845 2629 ntBASIC19.49■□□□□ 0.71
USP6NLQ92738 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
USP6NLQ92738 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.49■□□□□ 0.71
USP6NLQ92738 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6NLQ92738 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.49■□□□□ 0.71
USP6NLQ92738 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.49■□□□□ 0.71
USP6NLQ92738 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6NLQ92738 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6NLQ92738 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
USP6NLQ92738 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.49■□□□□ 0.71
USP6NLQ92738 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.49■□□□□ 0.71
USP6NLQ92738 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.49■□□□□ 0.71
USP6NLQ92738 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.49■□□□□ 0.71
USP6NLQ92738 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP6NLQ92738 LINC01225-203ENST00000563550 1244 ntBASIC19.49■□□□□ 0.71
USP6NLQ92738 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.49■□□□□ 0.71
USP6NLQ92738 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
USP6NLQ92738 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP6NLQ92738 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP6NLQ92738 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.49■□□□□ 0.71
USP6NLQ92738 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
USP6NLQ92738 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP6NLQ92738 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6NLQ92738 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP6NLQ92738 REXO1L11P-201ENST00000620964 1927 ntBASIC19.49■□□□□ 0.71
USP6NLQ92738 TUBB3P1-201ENST00000405796 1332 ntBASIC19.49■□□□□ 0.71
USP6NLQ92738 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP6NLQ92738 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.48■□□□□ 0.71
USP6NLQ92738 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.48■□□□□ 0.71
USP6NLQ92738 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.48■□□□□ 0.71
USP6NLQ92738 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP6NLQ92738 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.48■□□□□ 0.71
USP6NLQ92738 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.48■□□□□ 0.71
USP6NLQ92738 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP6NLQ92738 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP6NLQ92738 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP6NLQ92738 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP6NLQ92738 AC002472.2-201ENST00000442739 958 ntBASIC19.48■□□□□ 0.71
USP6NLQ92738 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.48■□□□□ 0.71
USP6NLQ92738 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.48■□□□□ 0.71
USP6NLQ92738 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms