Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.44■□□□□ 0.54
DDX1Q92499 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX1Q92499 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX1Q92499 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DDX1Q92499 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX1Q92499 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
DDX1Q92499 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX1Q92499 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX1Q92499 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DDX1Q92499 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DDX1Q92499 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX1Q92499 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.43■□□□□ 0.54
DDX1Q92499 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
DDX1Q92499 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX1Q92499 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.43■□□□□ 0.54
DDX1Q92499 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DDX1Q92499 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
DDX1Q92499 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.43■□□□□ 0.54
DDX1Q92499 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.43■□□□□ 0.54
DDX1Q92499 AL591684.3-201ENST00000605187 298 ntBASIC18.43■□□□□ 0.54
DDX1Q92499 AP001269.4-201ENST00000609611 512 ntBASIC18.43■□□□□ 0.54
DDX1Q92499 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.43■□□□□ 0.54
DDX1Q92499 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX1Q92499 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.43■□□□□ 0.54
DDX1Q92499 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DDX1Q92499 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
DDX1Q92499 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX1Q92499 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DDX1Q92499 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX1Q92499 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
DDX1Q92499 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX1Q92499 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
DDX1Q92499 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DDX1Q92499 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.42■□□□□ 0.54
DDX1Q92499 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.42■□□□□ 0.54
DDX1Q92499 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX1Q92499 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX1Q92499 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
DDX1Q92499 AP005117.1-201ENST00000584346 1413 ntBASIC18.42■□□□□ 0.54
DDX1Q92499 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.42■□□□□ 0.54
DDX1Q92499 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX1Q92499 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.42■□□□□ 0.54
DDX1Q92499 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX1Q92499 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DDX1Q92499 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.42■□□□□ 0.54
DDX1Q92499 AL020989.1-201ENST00000422979 469 ntBASIC18.42■□□□□ 0.54
DDX1Q92499 HMGN1P19-201ENST00000436976 333 ntBASIC18.42■□□□□ 0.54
DDX1Q92499 AC132008.2-207ENST00000454517 770 ntBASIC18.42■□□□□ 0.54
DDX1Q92499 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.42■□□□□ 0.54
DDX1Q92499 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.42■□□□□ 0.54
DDX1Q92499 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.42■□□□□ 0.54
DDX1Q92499 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
DDX1Q92499 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DDX1Q92499 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX1Q92499 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
DDX1Q92499 AC004817.3-201ENST00000602957 2129 ntBASIC18.42■□□□□ 0.54
DDX1Q92499 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
DDX1Q92499 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DDX1Q92499 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
DDX1Q92499 NKILA-202ENST00000614771 2598 ntBASIC18.42■□□□□ 0.54
DDX1Q92499 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DDX1Q92499 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.42■□□□□ 0.54
DDX1Q92499 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
DDX1Q92499 AC079776.2-201ENST00000641154 1609 ntBASIC18.41■□□□□ 0.54
DDX1Q92499 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.41■□□□□ 0.54
DDX1Q92499 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.41■□□□□ 0.54
DDX1Q92499 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
DDX1Q92499 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DDX1Q92499 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.41■□□□□ 0.54
DDX1Q92499 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX1Q92499 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX1Q92499 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX1Q92499 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX1Q92499 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.41■□□□□ 0.54
DDX1Q92499 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.41■□□□□ 0.54
DDX1Q92499 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.41■□□□□ 0.54
DDX1Q92499 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.41■□□□□ 0.54
DDX1Q92499 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.41■□□□□ 0.54
DDX1Q92499 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.41■□□□□ 0.54
DDX1Q92499 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
DDX1Q92499 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DDX1Q92499 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.41■□□□□ 0.54
DDX1Q92499 TERC-201ENST00000602385 541 ntBASIC18.41■□□□□ 0.54
DDX1Q92499 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX1Q92499 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
DDX1Q92499 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.41■□□□□ 0.54
DDX1Q92499 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DDX1Q92499 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
DDX1Q92499 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.41■□□□□ 0.54
DDX1Q92499 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DDX1Q92499 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX1Q92499 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
DDX1Q92499 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX1Q92499 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX1Q92499 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX1Q92499 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX1Q92499 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX1Q92499 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX1Q92499 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX1Q92499 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms