Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 AL136038.4-201ENST00000603606 1261 ntBASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
RAB40AQ8WXH6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB40AQ8WXH6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RAB40AQ8WXH6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.27■□□□□ 0.03
RAB40AQ8WXH6 FLJ38576-201ENST00000623820 2459 ntBASIC15.27■□□□□ 0.03
RAB40AQ8WXH6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
RAB40AQ8WXH6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB40AQ8WXH6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RAB40AQ8WXH6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB40AQ8WXH6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
RAB40AQ8WXH6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RAB40AQ8WXH6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RAB40AQ8WXH6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB40AQ8WXH6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RAB40AQ8WXH6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RAB40AQ8WXH6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RAB40AQ8WXH6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 AL391807.1-203ENST00000604392 2365 ntBASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 AL645929.1-201ENST00000420084 975 ntBASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 HLA-F-220ENST00000434407 884 ntBASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 SPDYE13P-201ENST00000445314 798 ntBASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 AC079602.3-201ENST00000623931 403 ntBASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40AQ8WXH6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB40AQ8WXH6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms