Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 AL133466.1-201ENST00000447582 150 ntBASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 AL589739.1-201ENST00000607720 493 ntBASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 TEX21P-204ENST00000641479 1693 ntBASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 AC023141.7-201ENST00000430646 407 ntBASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 AL512306.1-201ENST00000432698 848 ntBASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 AC091804.1-201ENST00000486888 567 ntBASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 AC044860.1-202ENST00000559481 777 ntBASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 AC093726.1-201ENST00000608064 963 ntBASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 FBXW4P1-201ENST00000426721 2239 ntBASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 AL079307.3-201ENST00000556114 283 ntBASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 FUT8-AS1-201ENST00000621019 1521 ntBASIC6.89□□□□□ -1.31
SYNE2Q8WXH0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 IFT20-208ENST00000578985 831 ntTSL 3 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 AP000346.4-201ENST00000614827 381 ntBASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 KRTAP10-13P-201ENST00000412914 571 ntBASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 AP001065.2-201ENST00000617205 644 ntBASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 MIR4741-201ENST00000579822 90 ntBASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 AC134698.3-201ENST00000523880 214 ntBASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SYNE2Q8WXH0 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms