Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNIH3Q8TBE1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 TSPY17P-201ENST00000450329 467 ntBASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 AC024243.1-201ENST00000609234 778 ntBASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNIH3Q8TBE1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 AC092850.2-201ENST00000623821 2697 ntBASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 SLC25A1P2-201ENST00000430693 912 ntBASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 AC113404.2-201ENST00000507884 177 ntBASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNIH3Q8TBE1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms