Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTL9Q8NET4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTL9Q8NET4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTL9Q8NET4 AC008764.6-201ENST00000595909 2069 ntBASIC21.2■□□□□ 0.98
RTL9Q8NET4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC21.2■□□□□ 0.98
RTL9Q8NET4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.2■□□□□ 0.98
RTL9Q8NET4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTL9Q8NET4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTL9Q8NET4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTL9Q8NET4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTL9Q8NET4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RTL9Q8NET4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC21.2■□□□□ 0.98
RTL9Q8NET4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
RTL9Q8NET4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC21.2■□□□□ 0.98
RTL9Q8NET4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC21.2■□□□□ 0.98
RTL9Q8NET4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RTL9Q8NET4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTL9Q8NET4 AL645728.2-201ENST00000641974 660 ntBASIC21.2■□□□□ 0.98
RTL9Q8NET4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTL9Q8NET4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.2■□□□□ 0.98
RTL9Q8NET4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTL9Q8NET4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTL9Q8NET4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTL9Q8NET4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.19■□□□□ 0.98
RTL9Q8NET4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC21.19■□□□□ 0.98
RTL9Q8NET4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTL9Q8NET4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTL9Q8NET4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTL9Q8NET4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTL9Q8NET4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTL9Q8NET4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTL9Q8NET4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RTL9Q8NET4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.19■□□□□ 0.98
RTL9Q8NET4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTL9Q8NET4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC21.19■□□□□ 0.98
RTL9Q8NET4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC21.19■□□□□ 0.98
RTL9Q8NET4 MIR770-201ENST00000390219 98 ntBASIC21.19■□□□□ 0.98
RTL9Q8NET4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.19■□□□□ 0.98
RTL9Q8NET4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTL9Q8NET4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC21.19■□□□□ 0.98
RTL9Q8NET4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.19■□□□□ 0.98
RTL9Q8NET4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTL9Q8NET4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTL9Q8NET4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC21.19■□□□□ 0.98
RTL9Q8NET4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.19■□□□□ 0.98
RTL9Q8NET4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTL9Q8NET4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC21.19■□□□□ 0.98
RTL9Q8NET4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTL9Q8NET4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTL9Q8NET4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTL9Q8NET4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTL9Q8NET4 AL121761.2-201ENST00000598007 1648 ntBASIC21.19■□□□□ 0.98
RTL9Q8NET4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTL9Q8NET4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTL9Q8NET4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTL9Q8NET4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTL9Q8NET4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTL9Q8NET4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.18■□□□□ 0.98
RTL9Q8NET4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.18■□□□□ 0.98
RTL9Q8NET4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTL9Q8NET4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC21.18■□□□□ 0.98
RTL9Q8NET4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTL9Q8NET4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RTL9Q8NET4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTL9Q8NET4 NEFHP1-201ENST00000412845 2629 ntBASIC21.18■□□□□ 0.98
RTL9Q8NET4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTL9Q8NET4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
RTL9Q8NET4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTL9Q8NET4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.18■□□□□ 0.98
RTL9Q8NET4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTL9Q8NET4 TSEN15P1-201ENST00000423257 515 ntBASIC21.18■□□□□ 0.98
RTL9Q8NET4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC21.18■□□□□ 0.98
RTL9Q8NET4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTL9Q8NET4 AC140658.5-201ENST00000438532 169 ntBASIC21.18■□□□□ 0.98
RTL9Q8NET4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.18■□□□□ 0.98
RTL9Q8NET4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC21.18■□□□□ 0.98
RTL9Q8NET4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.18■□□□□ 0.98
RTL9Q8NET4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.18■□□□□ 0.98
RTL9Q8NET4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RTL9Q8NET4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.18■□□□□ 0.98
RTL9Q8NET4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.18■□□□□ 0.98
RTL9Q8NET4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RTL9Q8NET4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RTL9Q8NET4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC21.18■□□□□ 0.98
RTL9Q8NET4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RTL9Q8NET4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.18■□□□□ 0.98
RTL9Q8NET4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC21.18■□□□□ 0.98
RTL9Q8NET4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RTL9Q8NET4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTL9Q8NET4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.18■□□□□ 0.98
RTL9Q8NET4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC21.18■□□□□ 0.98
RTL9Q8NET4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTL9Q8NET4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTL9Q8NET4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.17■□□□□ 0.98
RTL9Q8NET4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTL9Q8NET4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTL9Q8NET4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.17■□□□□ 0.98
RTL9Q8NET4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTL9Q8NET4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTL9Q8NET4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms