Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 AL662844.4-201ENST00000606367 2838 ntBASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 AP000550.4-202ENST00000639755 178 ntBASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LSMEM1Q8N8F7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 LINC00554-201ENST00000564841 3011 ntBASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 AP002414.4-201ENST00000589764 1148 ntBASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.89■□□□□ 0.13
LSMEM1Q8N8F7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 INTS4P1-201ENST00000438455 1935 ntBASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 AC009336.1-201ENST00000608941 1553 ntBASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 AC003669.1-201ENST00000334569 611 ntBASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 IGHV3-47-201ENST00000425060 335 ntBASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 KRT17P6-201ENST00000453795 1220 ntBASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms