Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LINC00311Q8N616 BX005266.1-201ENST00000473402 457 ntBASIC14.03□□□□□ -0.16
LINC00311Q8N616 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.03□□□□□ -0.16
LINC00311Q8N616 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.03□□□□□ -0.16
LINC00311Q8N616 AL353135.1-201ENST00000606729 504 ntBASIC14.03□□□□□ -0.16
LINC00311Q8N616 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00311Q8N616 AL589182.2-201ENST00000619332 1049 ntBASIC14.03□□□□□ -0.16
LINC00311Q8N616 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LINC00311Q8N616 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LINC00311Q8N616 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00311Q8N616 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC00311Q8N616 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00311Q8N616 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.03□□□□□ -0.16
LINC00311Q8N616 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00311Q8N616 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00311Q8N616 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
LINC00311Q8N616 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00311Q8N616 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00311Q8N616 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LINC00311Q8N616 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00311Q8N616 FRMD8P1-201ENST00000440433 1524 ntBASIC14.02□□□□□ -0.16
LINC00311Q8N616 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00311Q8N616 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00311Q8N616 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LINC00311Q8N616 AKR1C7P-201ENST00000305623 895 ntBASIC14.02□□□□□ -0.17
LINC00311Q8N616 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00311Q8N616 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00311Q8N616 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.02□□□□□ -0.17
LINC00311Q8N616 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
LINC00311Q8N616 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LINC00311Q8N616 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00311Q8N616 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LINC00311Q8N616 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LINC00311Q8N616 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00311Q8N616 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00311Q8N616 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00311Q8N616 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00311Q8N616 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00311Q8N616 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00311Q8N616 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LINC00311Q8N616 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00311Q8N616 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00311Q8N616 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00311Q8N616 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00311Q8N616 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00311Q8N616 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00311Q8N616 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00311Q8N616 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00311Q8N616 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00311Q8N616 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00311Q8N616 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
LINC00311Q8N616 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00311Q8N616 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00311Q8N616 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00311Q8N616 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00311Q8N616 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00311Q8N616 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.01□□□□□ -0.17
LINC00311Q8N616 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00311Q8N616 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.01□□□□□ -0.17
LINC00311Q8N616 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00311Q8N616 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00311Q8N616 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00311Q8N616 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00311Q8N616 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.01□□□□□ -0.17
LINC00311Q8N616 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LINC00311Q8N616 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00311Q8N616 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00311Q8N616 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LINC00311Q8N616 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LINC00311Q8N616 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LINC00311Q8N616 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00311Q8N616 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00311Q8N616 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LINC00311Q8N616 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00311Q8N616 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00311Q8N616 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00311Q8N616 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LINC00311Q8N616 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms