Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT78Q8N1N4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KRT78Q8N1N4 PKD1P5-201ENST00000532415 10291 ntBASIC16.75■□□□□ 0.27
KRT78Q8N1N4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KRT78Q8N1N4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT78Q8N1N4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KRT78Q8N1N4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.75■□□□□ 0.27
KRT78Q8N1N4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 AC108860.2-201ENST00000562760 2183 ntBASIC16.74■□□□□ 0.27
KRT78Q8N1N4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 AP000867.4-201ENST00000641616 219 ntBASIC16.74■□□□□ 0.27
KRT78Q8N1N4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT78Q8N1N4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 AL020989.1-201ENST00000422979 469 ntBASIC16.73■□□□□ 0.27
KRT78Q8N1N4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.73■□□□□ 0.27
KRT78Q8N1N4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 AC020916.1-201ENST00000587762 1774 ntBASIC16.72■□□□□ 0.27
KRT78Q8N1N4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT78Q8N1N4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms