Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 AP002469.2-201ENST00000531724 424 ntBASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 AC148477.8-201ENST00000624298 468 ntBASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 AC116353.5-201ENST00000638148 1699 ntBASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 AC093525.9-201ENST00000624961 1746 ntBASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 RPS2P1-201ENST00000434010 821 ntBASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 HNRNPDP1-201ENST00000439535 754 ntBASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SCUBE3Q8IX30 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
SCUBE3Q8IX30 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
SCUBE3Q8IX30 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SCUBE3Q8IX30 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 LINC00982-205ENST00000420957 435 ntBASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 AC073648.2-201ENST00000510116 352 ntBASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCUBE3Q8IX30 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms