Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 ACTG1P4-201ENST00000425123 1122 ntBASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 AC004790.2-201ENST00000623588 572 ntBASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCN4BQ8IWT1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 RNA5SP416-201ENST00000516838 111 ntBASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 AC092865.5-201ENST00000545435 363 ntBASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 AC008667.4-201ENST00000607370 168 ntBASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 AL805961.1-202ENST00000641562 540 ntBASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SCN4BQ8IWT1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 CRYGEP-201ENST00000412192 528 ntBASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 IGHV3-65-201ENST00000523210 341 ntBASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCN4BQ8IWT1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms