Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 AP000550.4-202ENST00000639755 178 ntBASIC18.04■□□□□ 0.48
RFX6Q8HWS3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFX6Q8HWS3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 AL353593.2-201ENST00000602529 1483 ntBASIC18.03■□□□□ 0.48
RFX6Q8HWS3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 KRT17P6-201ENST00000453795 1220 ntBASIC18.03■□□□□ 0.48
RFX6Q8HWS3 AC096582.2-201ENST00000510860 516 ntBASIC18.03■□□□□ 0.48
RFX6Q8HWS3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 NKILA-202ENST00000614771 2598 ntBASIC18.03■□□□□ 0.48
RFX6Q8HWS3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 NSUN5P1-202ENST00000421140 1535 ntBASIC18.03■□□□□ 0.48
RFX6Q8HWS3 NSUN5P2-203ENST00000457352 1529 ntBASIC18.03■□□□□ 0.48
RFX6Q8HWS3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFX6Q8HWS3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 LINC02012-201ENST00000608206 1725 ntBASIC18.02■□□□□ 0.48
RFX6Q8HWS3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.02■□□□□ 0.48
RFX6Q8HWS3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
RFX6Q8HWS3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RFX6Q8HWS3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RFX6Q8HWS3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
RFX6Q8HWS3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RFX6Q8HWS3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RFX6Q8HWS3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.02■□□□□ 0.47
RFX6Q8HWS3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFX6Q8HWS3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX6Q8HWS3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
RFX6Q8HWS3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX6Q8HWS3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX6Q8HWS3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RFX6Q8HWS3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX6Q8HWS3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX6Q8HWS3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX6Q8HWS3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.01■□□□□ 0.47
RFX6Q8HWS3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFX6Q8HWS3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX6Q8HWS3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.01■□□□□ 0.47
RFX6Q8HWS3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX6Q8HWS3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms