Protein–RNA interactions for Protein: Q86XW9

NME9, Thioredoxin domain-containing protein 6, humanhuman

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME9Q86XW9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NME9Q86XW9 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NME9Q86XW9 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC23.2■■□□□ 1.3
NME9Q86XW9 AC023141.5-201ENST00000458585 616 ntBASIC23.2■■□□□ 1.3
NME9Q86XW9 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC23.2■■□□□ 1.3
NME9Q86XW9 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
NME9Q86XW9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NME9Q86XW9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NME9Q86XW9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NME9Q86XW9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC23.2■■□□□ 1.3
NME9Q86XW9 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
NME9Q86XW9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
NME9Q86XW9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
NME9Q86XW9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NME9Q86XW9 NEFHP1-201ENST00000412845 2629 ntBASIC23.19■■□□□ 1.3
NME9Q86XW9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC23.19■■□□□ 1.3
NME9Q86XW9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC23.19■■□□□ 1.3
NME9Q86XW9 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
NME9Q86XW9 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NME9Q86XW9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
NME9Q86XW9 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NME9Q86XW9 SLC25A1P3-201ENST00000395415 828 ntBASIC23.19■■□□□ 1.3
NME9Q86XW9 AC002056.1-201ENST00000395613 760 ntBASIC23.19■■□□□ 1.3
NME9Q86XW9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NME9Q86XW9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
NME9Q86XW9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC23.19■■□□□ 1.3
NME9Q86XW9 AL645728.2-201ENST00000641974 660 ntBASIC23.19■■□□□ 1.3
NME9Q86XW9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
NME9Q86XW9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NME9Q86XW9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC23.19■■□□□ 1.3
NME9Q86XW9 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC23.19■■□□□ 1.3
NME9Q86XW9 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NME9Q86XW9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC23.19■■□□□ 1.3
NME9Q86XW9 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NME9Q86XW9 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NME9Q86XW9 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC23.18■■□□□ 1.3
NME9Q86XW9 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
NME9Q86XW9 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NME9Q86XW9 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC23.18■■□□□ 1.3
NME9Q86XW9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NME9Q86XW9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.18■■□□□ 1.3
NME9Q86XW9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NME9Q86XW9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NME9Q86XW9 HMGA1P7-201ENST00000406908 502 ntBASIC23.18■■□□□ 1.3
NME9Q86XW9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC23.18■■□□□ 1.3
NME9Q86XW9 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
NME9Q86XW9 AC004449.1-201ENST00000564240 433 ntBASIC23.18■■□□□ 1.3
NME9Q86XW9 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC23.18■■□□□ 1.3
NME9Q86XW9 AC026120.1-201ENST00000611536 926 ntBASIC23.18■■□□□ 1.3
NME9Q86XW9 AC093512.1-201ENST00000617969 520 ntBASIC23.18■■□□□ 1.3
NME9Q86XW9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC23.18■■□□□ 1.3
NME9Q86XW9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NME9Q86XW9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
NME9Q86XW9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NME9Q86XW9 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC23.18■■□□□ 1.3
NME9Q86XW9 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NME9Q86XW9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NME9Q86XW9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NME9Q86XW9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
NME9Q86XW9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NME9Q86XW9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC23.17■■□□□ 1.3
NME9Q86XW9 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC23.17■■□□□ 1.3
NME9Q86XW9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NME9Q86XW9 AC008764.6-201ENST00000595909 2069 ntBASIC23.17■■□□□ 1.3
NME9Q86XW9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC23.17■■□□□ 1.3
NME9Q86XW9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC23.17■■□□□ 1.3
NME9Q86XW9 MIR770-201ENST00000390219 98 ntBASIC23.17■■□□□ 1.3
NME9Q86XW9 AL627223.1-201ENST00000416693 442 ntBASIC23.17■■□□□ 1.3
NME9Q86XW9 AL671277.1-201ENST00000429656 993 ntBASIC23.17■■□□□ 1.3
NME9Q86XW9 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC23.17■■□□□ 1.3
NME9Q86XW9 CD7-202ENST00000578509 925 ntTSL 3 BASIC23.17■■□□□ 1.3
NME9Q86XW9 MIR4515-201ENST00000584082 81 ntBASIC23.17■■□□□ 1.3
NME9Q86XW9 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
NME9Q86XW9 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
NME9Q86XW9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC23.17■■□□□ 1.3
NME9Q86XW9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NME9Q86XW9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
NME9Q86XW9 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC23.17■■□□□ 1.3
NME9Q86XW9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
NME9Q86XW9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
NME9Q86XW9 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NME9Q86XW9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NME9Q86XW9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NME9Q86XW9 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NME9Q86XW9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NME9Q86XW9 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NME9Q86XW9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NME9Q86XW9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
NME9Q86XW9 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC23.16■■□□□ 1.3
NME9Q86XW9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC23.16■■□□□ 1.3
NME9Q86XW9 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC23.16■■□□□ 1.3
NME9Q86XW9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC23.16■■□□□ 1.3
NME9Q86XW9 LINC00628-201ENST00000628516 1289 ntBASIC23.16■■□□□ 1.3
NME9Q86XW9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC23.16■■□□□ 1.3
NME9Q86XW9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NME9Q86XW9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
NME9Q86XW9 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
NME9Q86XW9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC23.15■■□□□ 1.3
NME9Q86XW9 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NME9Q86XW9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms