Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CHD1LQ86WJ1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHD1LQ86WJ1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CHD1LQ86WJ1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHD1LQ86WJ1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHD1LQ86WJ1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHD1LQ86WJ1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CHD1LQ86WJ1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CHD1LQ86WJ1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
CHD1LQ86WJ1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CHD1LQ86WJ1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC21.39■■□□□ 1.02
CHD1LQ86WJ1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD1LQ86WJ1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD1LQ86WJ1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD1LQ86WJ1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD1LQ86WJ1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.39■■□□□ 1.01
CHD1LQ86WJ1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD1LQ86WJ1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD1LQ86WJ1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD1LQ86WJ1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.39■■□□□ 1.01
CHD1LQ86WJ1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CHD1LQ86WJ1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.39■■□□□ 1.01
CHD1LQ86WJ1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CHD1LQ86WJ1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD1LQ86WJ1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD1LQ86WJ1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.01
CHD1LQ86WJ1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD1LQ86WJ1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD1LQ86WJ1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD1LQ86WJ1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD1LQ86WJ1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 RNF216P1-203ENST00000404404 2427 ntBASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 AC099336.1-202ENST00000602961 463 ntBASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 FRMD8P1-201ENST00000440433 1524 ntBASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD1LQ86WJ1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHD1LQ86WJ1 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHD1LQ86WJ1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC21.37■■□□□ 1.01
CHD1LQ86WJ1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC21.37■■□□□ 1.01
CHD1LQ86WJ1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
CHD1LQ86WJ1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHD1LQ86WJ1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHD1LQ86WJ1 ARMC10P1-201ENST00000313754 855 ntBASIC21.37■■□□□ 1.01
CHD1LQ86WJ1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHD1LQ86WJ1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHD1LQ86WJ1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHD1LQ86WJ1 MIR5100-201ENST00000579544 119 ntBASIC21.37■■□□□ 1.01
CHD1LQ86WJ1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CHD1LQ86WJ1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.37■■□□□ 1.01
CHD1LQ86WJ1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CHD1LQ86WJ1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC21.37■■□□□ 1.01
CHD1LQ86WJ1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHD1LQ86WJ1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHD1LQ86WJ1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHD1LQ86WJ1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CHD1LQ86WJ1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHD1LQ86WJ1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CHD1LQ86WJ1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD1LQ86WJ1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD1LQ86WJ1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHD1LQ86WJ1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHD1LQ86WJ1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC21.36■■□□□ 1.01
CHD1LQ86WJ1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC21.36■■□□□ 1.01
CHD1LQ86WJ1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD1LQ86WJ1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD1LQ86WJ1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD1LQ86WJ1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
CHD1LQ86WJ1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC21.36■■□□□ 1.01
CHD1LQ86WJ1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD1LQ86WJ1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.36■■□□□ 1.01
CHD1LQ86WJ1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHD1LQ86WJ1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC21.36■■□□□ 1.01
CHD1LQ86WJ1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD1LQ86WJ1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD1LQ86WJ1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHD1LQ86WJ1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.36■■□□□ 1.01
CHD1LQ86WJ1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms