Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 AL121761.2-201ENST00000598007 1648 ntBASIC15.25■□□□□ 0.03
HIST2H3AQ71DI3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 AC104819.1-201ENST00000504587 486 ntBASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 PMPCAP1-201ENST00000508114 1576 ntBASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST2H3AQ71DI3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 AC093525.9-201ENST00000624961 1746 ntBASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 AC084018.2-201ENST00000613093 2607 ntBASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 AC096582.2-201ENST00000510860 516 ntBASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 STK19B-204ENST00000512515 211 ntBASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 AP000867.3-201ENST00000524675 377 ntBASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 AP000867.4-201ENST00000641616 219 ntBASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 AC080080.1-201ENST00000625121 2420 ntBASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST2H3AQ71DI3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST2H3AQ71DI3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST2H3AQ71DI3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
HIST2H3AQ71DI3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST2H3AQ71DI3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST2H3AQ71DI3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST2H3AQ71DI3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms