Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 BX842568.4-201ENST00000421222 227 ntBASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 AC005104.2-201ENST00000427818 678 ntBASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 AL390961.4-201ENST00000623958 2535 ntBASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF17Q5VTA0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF17Q5VTA0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.52■□□□□ 0.24
PRAMEF17Q5VTA0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF17Q5VTA0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF17Q5VTA0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF17Q5VTA0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.52■□□□□ 0.24
PRAMEF17Q5VTA0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF17Q5VTA0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF17Q5VTA0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PRAMEF17Q5VTA0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PRAMEF17Q5VTA0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PRAMEF17Q5VTA0 LINC00982-205ENST00000420957 435 ntBASIC16.52■□□□□ 0.24
PRAMEF17Q5VTA0 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.52■□□□□ 0.24
PRAMEF17Q5VTA0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.52■□□□□ 0.24
PRAMEF17Q5VTA0 KRT18P2-201ENST00000447938 1258 ntBASIC16.52■□□□□ 0.24
PRAMEF17Q5VTA0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.52■□□□□ 0.24
PRAMEF17Q5VTA0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF17Q5VTA0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.52■□□□□ 0.24
PRAMEF17Q5VTA0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.52■□□□□ 0.24
PRAMEF17Q5VTA0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF17Q5VTA0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEF17Q5VTA0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.52■□□□□ 0.23
PRAMEF17Q5VTA0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEF17Q5VTA0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEF17Q5VTA0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEF17Q5VTA0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEF17Q5VTA0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.52■□□□□ 0.23
PRAMEF17Q5VTA0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.52■□□□□ 0.23
PRAMEF17Q5VTA0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEF17Q5VTA0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 AC023274.1-201ENST00000418278 595 ntBASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 RPS15P9-201ENST00000494093 319 ntBASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 AC064836.3-201ENST00000607928 673 ntBASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEF17Q5VTA0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.5■□□□□ 0.23
PRAMEF17Q5VTA0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF17Q5VTA0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms