Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 AC091076.1-201ENST00000610741 619 ntBASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 AC009154.2-201ENST00000621177 724 ntBASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 AP000550.4-202ENST00000639755 178 ntBASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 LINC00304-203ENST00000565008 1864 ntBASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 Z83836.1-201ENST00000624605 1642 ntBASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.09■□□□□ 0.01
ATPAF1Q5TC12 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
ATPAF1Q5TC12 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ATPAF1Q5TC12 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
ATPAF1Q5TC12 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.08■□□□□ 0.01
ATPAF1Q5TC12 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
ATPAF1Q5TC12 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ATPAF1Q5TC12 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
ATPAF1Q5TC12 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
ATPAF1Q5TC12 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ATPAF1Q5TC12 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.08■□□□□ 0
ATPAF1Q5TC12 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.08■□□□□ 0
ATPAF1Q5TC12 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.08■□□□□ 0
ATPAF1Q5TC12 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.08■□□□□ 0
ATPAF1Q5TC12 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.08■□□□□ 0
ATPAF1Q5TC12 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.08■□□□□ 0
ATPAF1Q5TC12 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.08■□□□□ 0
ATPAF1Q5TC12 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.08■□□□□ 0
ATPAF1Q5TC12 TSPY22P-201ENST00000427496 604 ntBASIC15.08■□□□□ 0
ATPAF1Q5TC12 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
ATPAF1Q5TC12 KRT8P26-201ENST00000534154 1276 ntBASIC15.08■□□□□ 0
ATPAF1Q5TC12 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
ATPAF1Q5TC12 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
ATPAF1Q5TC12 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.08■□□□□ 0
ATPAF1Q5TC12 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ATPAF1Q5TC12 AC132938.6-201ENST00000623828 1655 ntBASIC15.08■□□□□ 0
ATPAF1Q5TC12 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
ATPAF1Q5TC12 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ATPAF1Q5TC12 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
ATPAF1Q5TC12 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.08■□□□□ 0
ATPAF1Q5TC12 IER3-202ENST00000376377 1350 ntBASIC15.08■□□□□ 0
ATPAF1Q5TC12 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.08■□□□□ 0
ATPAF1Q5TC12 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
ATPAF1Q5TC12 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ATPAF1Q5TC12 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.08■□□□□ 0
ATPAF1Q5TC12 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ATPAF1Q5TC12 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
ATPAF1Q5TC12 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ATPAF1Q5TC12 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.08■□□□□ 0
ATPAF1Q5TC12 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
ATPAF1Q5TC12 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
ATPAF1Q5TC12 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.07■□□□□ 0
ATPAF1Q5TC12 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.07■□□□□ 0
ATPAF1Q5TC12 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
ATPAF1Q5TC12 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.07■□□□□ 0
ATPAF1Q5TC12 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.07■□□□□ 0
ATPAF1Q5TC12 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATPAF1Q5TC12 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATPAF1Q5TC12 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.07■□□□□ 0
ATPAF1Q5TC12 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.07■□□□□ 0
ATPAF1Q5TC12 TSPY12P-201ENST00000421279 868 ntBASIC15.07■□□□□ 0
ATPAF1Q5TC12 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.07■□□□□ 0
ATPAF1Q5TC12 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.07■□□□□ 0
ATPAF1Q5TC12 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.07■□□□□ 0
ATPAF1Q5TC12 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.07■□□□□ 0
ATPAF1Q5TC12 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.07■□□□□ 0
ATPAF1Q5TC12 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.07■□□□□ 0
ATPAF1Q5TC12 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.07■□□□□ 0
ATPAF1Q5TC12 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.07■□□□□ 0
ATPAF1Q5TC12 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.07■□□□□ 0
ATPAF1Q5TC12 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.07■□□□□ 0
ATPAF1Q5TC12 AC022898.2-201ENST00000616822 1312 ntBASIC15.07■□□□□ 0
ATPAF1Q5TC12 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.07■□□□□ 0
ATPAF1Q5TC12 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
ATPAF1Q5TC12 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATPAF1Q5TC12 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
ATPAF1Q5TC12 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATPAF1Q5TC12 AC100803.2-201ENST00000562459 1963 ntBASIC15.07■□□□□ 0
ATPAF1Q5TC12 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.07■□□□□ 0
ATPAF1Q5TC12 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATPAF1Q5TC12 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms