Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.86□□□□□ -0.03
LRRK2Q5S007 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.86□□□□□ -0.03
LRRK2Q5S007 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRK2Q5S007 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRK2Q5S007 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRK2Q5S007 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LRRK2Q5S007 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.85□□□□□ -0.03
LRRK2Q5S007 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRK2Q5S007 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRK2Q5S007 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRK2Q5S007 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRK2Q5S007 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LRRK2Q5S007 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LRRK2Q5S007 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRK2Q5S007 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
LRRK2Q5S007 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LRRK2Q5S007 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRK2Q5S007 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRK2Q5S007 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.85□□□□□ -0.03
LRRK2Q5S007 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRK2Q5S007 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LRRK2Q5S007 AL138918.1-201ENST00000568306 659 ntBASIC14.85□□□□□ -0.03
LRRK2Q5S007 AP3S2-216ENST00000617003 1561 ntBASIC14.85□□□□□ -0.03
LRRK2Q5S007 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.85□□□□□ -0.03
LRRK2Q5S007 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRK2Q5S007 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LRRK2Q5S007 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.85□□□□□ -0.03
LRRK2Q5S007 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRK2Q5S007 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRK2Q5S007 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRK2Q5S007 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRK2Q5S007 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRK2Q5S007 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRK2Q5S007 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.85□□□□□ -0.03
LRRK2Q5S007 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRK2Q5S007 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.85□□□□□ -0.03
LRRK2Q5S007 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRK2Q5S007 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRK2Q5S007 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRK2Q5S007 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
LRRK2Q5S007 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.85□□□□□ -0.03
LRRK2Q5S007 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRK2Q5S007 KRT223P-202ENST00000449164 1292 ntBASIC14.85□□□□□ -0.03
LRRK2Q5S007 BNIP3P42-201ENST00000454982 569 ntBASIC14.85□□□□□ -0.03
LRRK2Q5S007 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.85□□□□□ -0.03
LRRK2Q5S007 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRK2Q5S007 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRK2Q5S007 AC126763.1-201ENST00000552015 2118 ntBASIC14.85□□□□□ -0.03
LRRK2Q5S007 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LRRK2Q5S007 BNIP3P29-201ENST00000598302 571 ntBASIC14.85□□□□□ -0.03
LRRK2Q5S007 AC011447.5-201ENST00000616168 564 ntBASIC14.85□□□□□ -0.03
LRRK2Q5S007 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRK2Q5S007 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRRK2Q5S007 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRRK2Q5S007 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRRK2Q5S007 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRK2Q5S007 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRK2Q5S007 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRK2Q5S007 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRRK2Q5S007 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 AC011495.1-201ENST00000498085 584 ntBASIC14.84□□□□□ -0.03
LRRK2Q5S007 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 AC018529.1-201ENST00000613063 361 ntBASIC14.84□□□□□ -0.03
LRRK2Q5S007 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRK2Q5S007 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRK2Q5S007 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRK2Q5S007 PDIA3P1-201ENST00000471856 1510 ntBASIC14.84□□□□□ -0.03
LRRK2Q5S007 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRK2Q5S007 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRK2Q5S007 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRK2Q5S007 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRK2Q5S007 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRK2Q5S007 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 IGHV3-52-201ENST00000519770 353 ntBASIC14.84□□□□□ -0.03
LRRK2Q5S007 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.84□□□□□ -0.03
LRRK2Q5S007 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LRRK2Q5S007 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRRK2Q5S007 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRRK2Q5S007 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.83□□□□□ -0.03
LRRK2Q5S007 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRRK2Q5S007 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms