Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AL691403.2-201ENST00000618460 490 ntBASIC20.85■□□□□ 0.93
RFX7Q2KHR2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 AC020916.1-201ENST00000587762 1774 ntBASIC20.85■□□□□ 0.93
RFX7Q2KHR2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 DNAJB3-201ENST00000446806 729 ntBASIC20.85■□□□□ 0.93
RFX7Q2KHR2 HCG4B-203ENST00000450128 991 ntBASIC20.85■□□□□ 0.93
RFX7Q2KHR2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.85■□□□□ 0.93
RFX7Q2KHR2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFX7Q2KHR2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFX7Q2KHR2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFX7Q2KHR2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFX7Q2KHR2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFX7Q2KHR2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFX7Q2KHR2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.84■□□□□ 0.93
RFX7Q2KHR2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFX7Q2KHR2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFX7Q2KHR2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.84■□□□□ 0.93
RFX7Q2KHR2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFX7Q2KHR2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.84■□□□□ 0.93
RFX7Q2KHR2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.84■□□□□ 0.93
RFX7Q2KHR2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.84■□□□□ 0.93
RFX7Q2KHR2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
RFX7Q2KHR2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFX7Q2KHR2 AC023274.1-201ENST00000418278 595 ntBASIC20.84■□□□□ 0.93
RFX7Q2KHR2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.84■□□□□ 0.93
RFX7Q2KHR2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RFX7Q2KHR2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFX7Q2KHR2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFX7Q2KHR2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFX7Q2KHR2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.83■□□□□ 0.93
RFX7Q2KHR2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFX7Q2KHR2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.83■□□□□ 0.93
RFX7Q2KHR2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.83■□□□□ 0.93
RFX7Q2KHR2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
RFX7Q2KHR2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFX7Q2KHR2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
RFX7Q2KHR2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.93
RFX7Q2KHR2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
RFX7Q2KHR2 AP001094.4-201ENST00000579008 2176 ntBASIC20.83■□□□□ 0.93
RFX7Q2KHR2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
RFX7Q2KHR2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.83■□□□□ 0.92
RFX7Q2KHR2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFX7Q2KHR2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFX7Q2KHR2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFX7Q2KHR2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RFX7Q2KHR2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.83■□□□□ 0.92
RFX7Q2KHR2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.83■□□□□ 0.92
RFX7Q2KHR2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFX7Q2KHR2 AP002414.1-201ENST00000391405 1147 ntBASIC20.83■□□□□ 0.92
RFX7Q2KHR2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
RFX7Q2KHR2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.92
RFX7Q2KHR2 ALG1L5P-201ENST00000482043 771 ntBASIC20.83■□□□□ 0.92
RFX7Q2KHR2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RFX7Q2KHR2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.83■□□□□ 0.92
RFX7Q2KHR2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.83■□□□□ 0.92
RFX7Q2KHR2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RFX7Q2KHR2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFX7Q2KHR2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFX7Q2KHR2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFX7Q2KHR2 GPR89P-201ENST00000407924 1495 ntBASIC20.82■□□□□ 0.92
RFX7Q2KHR2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFX7Q2KHR2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFX7Q2KHR2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFX7Q2KHR2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RFX7Q2KHR2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RFX7Q2KHR2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFX7Q2KHR2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RFX7Q2KHR2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RFX7Q2KHR2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFX7Q2KHR2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.82■□□□□ 0.92
RFX7Q2KHR2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RFX7Q2KHR2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.82■□□□□ 0.92
RFX7Q2KHR2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.82■□□□□ 0.92
RFX7Q2KHR2 AC004967.1-201ENST00000453589 447 ntBASIC20.82■□□□□ 0.92
RFX7Q2KHR2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.82■□□□□ 0.92
RFX7Q2KHR2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.82■□□□□ 0.92
RFX7Q2KHR2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.82■□□□□ 0.92
RFX7Q2KHR2 AP001160.2-201ENST00000596071 487 ntBASIC20.82■□□□□ 0.92
RFX7Q2KHR2 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.82■□□□□ 0.92
RFX7Q2KHR2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFX7Q2KHR2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.82■□□□□ 0.92
RFX7Q2KHR2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFX7Q2KHR2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFX7Q2KHR2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms