Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 PCDHA1-201ENST00000378133 2726 ntBASIC13.32□□□□□ -0.28
HIST1H1AQ02539 DOC2GP-204ENST00000639052 2548 ntBASIC13.32□□□□□ -0.28
HIST1H1AQ02539 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 STARP1-201ENST00000397973 869 ntBASIC13.32□□□□□ -0.28
HIST1H1AQ02539 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 KRT18P57-201ENST00000443599 1254 ntBASIC13.32□□□□□ -0.28
HIST1H1AQ02539 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST1H1AQ02539 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 AC005521.1-201ENST00000393351 872 ntBASIC13.31□□□□□ -0.28
HIST1H1AQ02539 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 AC092647.4-201ENST00000457211 535 ntBASIC13.31□□□□□ -0.28
HIST1H1AQ02539 AL359075.1-203ENST00000462729 1002 ntBASIC13.31□□□□□ -0.28
HIST1H1AQ02539 AP003733.1-201ENST00000491725 852 ntBASIC13.31□□□□□ -0.28
HIST1H1AQ02539 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 PPOX-214ENST00000535223 664 ntTSL 3 BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 LINC01451-201ENST00000623792 534 ntBASIC13.31□□□□□ -0.28
HIST1H1AQ02539 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
HIST1H1AQ02539 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST1H1AQ02539 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H1AQ02539 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H1AQ02539 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
HIST1H1AQ02539 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H1AQ02539 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H1AQ02539 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.3□□□□□ -0.28
HIST1H1AQ02539 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms