Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CCL20P78556 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CCL20P78556 TK2-208ENST00000545043 1120 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL20P78556 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
CCL20P78556 AC009065.1-201ENST00000564055 1225 ntBASIC13.67□□□□□ -0.22
CCL20P78556 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.67□□□□□ -0.22
CCL20P78556 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL20P78556 MIR4674-201ENST00000582457 87 ntBASIC13.67□□□□□ -0.22
CCL20P78556 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL20P78556 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL20P78556 MTDHP1-201ENST00000605323 784 ntBASIC13.67□□□□□ -0.22
CCL20P78556 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL20P78556 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC13.67□□□□□ -0.22
CCL20P78556 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
CCL20P78556 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL20P78556 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL20P78556 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CCL20P78556 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL20P78556 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.67□□□□□ -0.22
CCL20P78556 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL20P78556 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL20P78556 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CCL20P78556 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL20P78556 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL20P78556 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL20P78556 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL20P78556 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL20P78556 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL20P78556 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL20P78556 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CCL20P78556 AC011506.1-201ENST00000474329 610 ntBASIC13.66□□□□□ -0.22
CCL20P78556 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.66□□□□□ -0.22
CCL20P78556 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL20P78556 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.66□□□□□ -0.22
CCL20P78556 AC073111.5-205ENST00000641717 521 ntBASIC13.66□□□□□ -0.22
CCL20P78556 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
CCL20P78556 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL20P78556 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL20P78556 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 KRT8P47-201ENST00000604727 1398 ntBASIC13.66□□□□□ -0.22
CCL20P78556 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CCL20P78556 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CCL20P78556 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL20P78556 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CCL20P78556 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL20P78556 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL20P78556 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL20P78556 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL20P78556 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL20P78556 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL20P78556 HLA-A-202ENST00000376806 1854 ntBASIC13.65□□□□□ -0.22
CCL20P78556 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL20P78556 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CCL20P78556 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL20P78556 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CCL20P78556 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CCL20P78556 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL20P78556 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL20P78556 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL20P78556 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL20P78556 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CCL20P78556 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL20P78556 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL20P78556 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL20P78556 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL20P78556 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL20P78556 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL20P78556 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL20P78556 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms