Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAE1P78406 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.43■□□□□ 0.22
RAE1P78406 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RAE1P78406 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAE1P78406 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.43■□□□□ 0.22
RAE1P78406 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAE1P78406 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RAE1P78406 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RAE1P78406 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RAE1P78406 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.43■□□□□ 0.22
RAE1P78406 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RAE1P78406 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.43■□□□□ 0.22
RAE1P78406 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAE1P78406 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAE1P78406 AC004817.3-201ENST00000602957 2129 ntBASIC16.43■□□□□ 0.22
RAE1P78406 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAE1P78406 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.43■□□□□ 0.22
RAE1P78406 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.43■□□□□ 0.22
RAE1P78406 SIGLEC16-201ENST00000599858 1437 ntBASIC16.43■□□□□ 0.22
RAE1P78406 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.43■□□□□ 0.22
RAE1P78406 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAE1P78406 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAE1P78406 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAE1P78406 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAE1P78406 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAE1P78406 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAE1P78406 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.42■□□□□ 0.22
RAE1P78406 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAE1P78406 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.42■□□□□ 0.22
RAE1P78406 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.42■□□□□ 0.22
RAE1P78406 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RAE1P78406 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAE1P78406 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAE1P78406 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.42■□□□□ 0.22
RAE1P78406 SIGLEC30P-201ENST00000455569 941 ntBASIC16.42■□□□□ 0.22
RAE1P78406 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.42■□□□□ 0.22
RAE1P78406 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
RAE1P78406 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.42■□□□□ 0.22
RAE1P78406 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.42■□□□□ 0.22
RAE1P78406 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.42■□□□□ 0.22
RAE1P78406 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.42■□□□□ 0.22
RAE1P78406 AC138894.3-201ENST00000603787 634 ntBASIC16.42■□□□□ 0.22
RAE1P78406 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.42■□□□□ 0.22
RAE1P78406 AL591684.3-201ENST00000605187 298 ntBASIC16.42■□□□□ 0.22
RAE1P78406 AC073592.4-201ENST00000623827 446 ntBASIC16.42■□□□□ 0.22
RAE1P78406 RNF216P1-203ENST00000404404 2427 ntBASIC16.42■□□□□ 0.22
RAE1P78406 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAE1P78406 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAE1P78406 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAE1P78406 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAE1P78406 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAE1P78406 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAE1P78406 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.42■□□□□ 0.22
RAE1P78406 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAE1P78406 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAE1P78406 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.42■□□□□ 0.22
RAE1P78406 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAE1P78406 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.42■□□□□ 0.22
RAE1P78406 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAE1P78406 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RAE1P78406 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAE1P78406 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAE1P78406 HCG11-201ENST00000411553 5696 ntBASIC16.41■□□□□ 0.22
RAE1P78406 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAE1P78406 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAE1P78406 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAE1P78406 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAE1P78406 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAE1P78406 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAE1P78406 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAE1P78406 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAE1P78406 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAE1P78406 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RAE1P78406 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
RAE1P78406 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAE1P78406 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.41■□□□□ 0.22
RAE1P78406 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAE1P78406 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
RAE1P78406 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.41■□□□□ 0.22
RAE1P78406 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.41■□□□□ 0.22
RAE1P78406 AP001269.4-201ENST00000609611 512 ntBASIC16.41■□□□□ 0.22
RAE1P78406 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.41■□□□□ 0.22
RAE1P78406 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.41■□□□□ 0.22
RAE1P78406 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RAE1P78406 GPR89P-201ENST00000407924 1495 ntBASIC16.41■□□□□ 0.22
RAE1P78406 AC079776.2-201ENST00000641154 1609 ntBASIC16.41■□□□□ 0.22
RAE1P78406 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAE1P78406 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAE1P78406 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
RAE1P78406 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAE1P78406 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RAE1P78406 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAE1P78406 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.4■□□□□ 0.22
RAE1P78406 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.4■□□□□ 0.22
RAE1P78406 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RAE1P78406 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.4■□□□□ 0.22
RAE1P78406 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAE1P78406 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAE1P78406 AC124067.4-201ENST00000519691 2379 ntBASIC16.4■□□□□ 0.22
RAE1P78406 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms