Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
SMIM11AP58511 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
SMIM11AP58511 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMIM11AP58511 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16■□□□□ 0.15
SMIM11AP58511 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMIM11AP58511 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16■□□□□ 0.15
SMIM11AP58511 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.99■□□□□ 0.15
SMIM11AP58511 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.99■□□□□ 0.15
SMIM11AP58511 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SMIM11AP58511 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
SMIM11AP58511 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
SMIM11AP58511 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SMIM11AP58511 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.99■□□□□ 0.15
SMIM11AP58511 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.99■□□□□ 0.15
SMIM11AP58511 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.99■□□□□ 0.15
SMIM11AP58511 AC111152.3-201ENST00000569699 673 ntBASIC15.99■□□□□ 0.15
SMIM11AP58511 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.99■□□□□ 0.15
SMIM11AP58511 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SMIM11AP58511 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
SMIM11AP58511 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
SMIM11AP58511 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.99■□□□□ 0.15
SMIM11AP58511 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.99■□□□□ 0.15
SMIM11AP58511 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.99■□□□□ 0.15
SMIM11AP58511 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
SMIM11AP58511 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMIM11AP58511 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMIM11AP58511 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMIM11AP58511 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.98■□□□□ 0.15
SMIM11AP58511 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMIM11AP58511 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SMIM11AP58511 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMIM11AP58511 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
SMIM11AP58511 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMIM11AP58511 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMIM11AP58511 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.98■□□□□ 0.15
SMIM11AP58511 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SMIM11AP58511 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMIM11AP58511 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.98■□□□□ 0.15
SMIM11AP58511 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SMIM11AP58511 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMIM11AP58511 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.98■□□□□ 0.15
SMIM11AP58511 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.98■□□□□ 0.15
SMIM11AP58511 BX664615.1-201ENST00000443558 458 ntBASIC15.98■□□□□ 0.15
SMIM11AP58511 AL359075.1-203ENST00000462729 1002 ntBASIC15.98■□□□□ 0.15
SMIM11AP58511 AC010460.3-201ENST00000511359 1579 ntBASIC15.98■□□□□ 0.15
SMIM11AP58511 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.98■□□□□ 0.15
SMIM11AP58511 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SMIM11AP58511 AC109462.3-201ENST00000573934 613 ntBASIC15.98■□□□□ 0.15
SMIM11AP58511 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SMIM11AP58511 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.98■□□□□ 0.15
SMIM11AP58511 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.98■□□□□ 0.15
SMIM11AP58511 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.98■□□□□ 0.15
SMIM11AP58511 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
SMIM11AP58511 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMIM11AP58511 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMIM11AP58511 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SMIM11AP58511 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SMIM11AP58511 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SMIM11AP58511 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SMIM11AP58511 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMIM11AP58511 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SMIM11AP58511 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMIM11AP58511 FLJ38576-201ENST00000623820 2459 ntBASIC15.97■□□□□ 0.15
SMIM11AP58511 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.97■□□□□ 0.15
SMIM11AP58511 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SMIM11AP58511 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SMIM11AP58511 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM11AP58511 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM11AP58511 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM11AP58511 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM11AP58511 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM11AP58511 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM11AP58511 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM11AP58511 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM11AP58511 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SMIM11AP58511 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.97■□□□□ 0.15
SMIM11AP58511 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.97■□□□□ 0.15
SMIM11AP58511 AC103564.2-201ENST00000432853 1299 ntBASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms