Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN12P56749 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN12P56749 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN12P56749 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN12P56749 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN12P56749 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN12P56749 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CLDN12P56749 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CLDN12P56749 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN12P56749 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN12P56749 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN12P56749 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN12P56749 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN12P56749 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CLDN12P56749 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN12P56749 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN12P56749 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN12P56749 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN12P56749 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN12P56749 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN12P56749 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN12P56749 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN12P56749 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN12P56749 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN12P56749 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CLDN12P56749 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN12P56749 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN12P56749 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CLDN12P56749 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN12P56749 LINC00554-201ENST00000564841 3011 ntBASIC15.11■□□□□ 0.01
CLDN12P56749 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.11■□□□□ 0.01
CLDN12P56749 TSPY20P-201ENST00000450910 630 ntBASIC15.11■□□□□ 0.01
CLDN12P56749 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN12P56749 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLDN12P56749 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN12P56749 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN12P56749 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN12P56749 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLDN12P56749 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CLDN12P56749 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN12P56749 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CLDN12P56749 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CLDN12P56749 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
CLDN12P56749 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN12P56749 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN12P56749 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN12P56749 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN12P56749 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CLDN12P56749 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN12P56749 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 AC026691.1-201ENST00000602502 2017 ntBASIC15.1■□□□□ 0.01
CLDN12P56749 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.1■□□□□ 0.01
CLDN12P56749 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN12P56749 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN12P56749 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN12P56749 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CLDN12P56749 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
CLDN12P56749 TSPY14P-201ENST00000303979 915 ntBASIC15.1■□□□□ 0.01
CLDN12P56749 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 TSPY7P-201ENST00000431358 1114 ntBASIC15.1■□□□□ 0.01
CLDN12P56749 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN12P56749 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.1■□□□□ 0.01
CLDN12P56749 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 AC112698.1-201ENST00000510299 916 ntBASIC15.1■□□□□ 0.01
CLDN12P56749 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.1■□□□□ 0.01
CLDN12P56749 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.1■□□□□ 0.01
CLDN12P56749 AC024563.2-201ENST00000603282 481 ntBASIC15.1■□□□□ 0.01
CLDN12P56749 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN12P56749 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN12P56749 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN12P56749 TSPY26P-202ENST00000565928 3884 ntBASIC15.1■□□□□ 0.01
CLDN12P56749 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN12P56749 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CLDN12P56749 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN12P56749 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CLDN12P56749 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN12P56749 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CLDN12P56749 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CLDN12P56749 AL391005.1-201ENST00000623953 2435 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms