Protein–RNA interactions for Protein: P56746

CLDN15, Claudin-15, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN15P56746 LINC00982-205ENST00000420957 435 ntBASIC15.58■□□□□ 0.08
CLDN15P56746 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.58■□□□□ 0.08
CLDN15P56746 AC098831.1-202ENST00000438821 336 ntBASIC15.58■□□□□ 0.08
CLDN15P56746 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.58■□□□□ 0.08
CLDN15P56746 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.58■□□□□ 0.08
CLDN15P56746 AC006557.2-201ENST00000592985 1240 ntBASIC15.58■□□□□ 0.08
CLDN15P56746 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CLDN15P56746 AL671883.3-201ENST00000603274 991 ntBASIC15.58■□□□□ 0.08
CLDN15P56746 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.58■□□□□ 0.08
CLDN15P56746 AF228730.7-201ENST00000641842 219 ntBASIC15.58■□□□□ 0.08
CLDN15P56746 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CLDN15P56746 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN15P56746 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN15P56746 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN15P56746 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.58■□□□□ 0.08
CLDN15P56746 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.58■□□□□ 0.08
CLDN15P56746 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN15P56746 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN15P56746 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN15P56746 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN15P56746 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN15P56746 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
CLDN15P56746 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.57■□□□□ 0.08
CLDN15P56746 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN15P56746 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN15P56746 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CLDN15P56746 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN15P56746 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CLDN15P56746 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDN15P56746 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDN15P56746 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDN15P56746 RPL13AP23-201ENST00000480739 586 ntBASIC15.57■□□□□ 0.08
CLDN15P56746 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDN15P56746 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDN15P56746 AC117500.6-201ENST00000624871 588 ntBASIC15.57■□□□□ 0.08
CLDN15P56746 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN15P56746 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN15P56746 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN15P56746 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CLDN15P56746 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN15P56746 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN15P56746 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.57■□□□□ 0.08
CLDN15P56746 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CLDN15P56746 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN15P56746 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN15P56746 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CLDN15P56746 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN15P56746 ELK2BP-201ENST00000415014 1224 ntBASIC15.56■□□□□ 0.08
CLDN15P56746 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN15P56746 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CLDN15P56746 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN15P56746 AL356488.2-201ENST00000602755 427 ntBASIC15.56■□□□□ 0.08
CLDN15P56746 AL353135.1-201ENST00000606729 504 ntBASIC15.56■□□□□ 0.08
CLDN15P56746 AL139424.1-201ENST00000607572 797 ntBASIC15.56■□□□□ 0.08
CLDN15P56746 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN15P56746 MIR1199-201ENST00000621445 119 ntBASIC15.56■□□□□ 0.08
CLDN15P56746 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CLDN15P56746 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN15P56746 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN15P56746 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CLDN15P56746 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN15P56746 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CLDN15P56746 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN15P56746 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN15P56746 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN15P56746 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN15P56746 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CLDN15P56746 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN15P56746 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN15P56746 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN15P56746 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.55■□□□□ 0.08
CLDN15P56746 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN15P56746 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDN15P56746 PCDHB18P-201ENST00000524813 2368 ntBASIC15.55■□□□□ 0.08
CLDN15P56746 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN15P56746 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN15P56746 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CLDN15P56746 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN15P56746 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN15P56746 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN15P56746 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CLDN15P56746 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDN15P56746 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN15P56746 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN15P56746 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN15P56746 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDN15P56746 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.55■□□□□ 0.08
CLDN15P56746 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDN15P56746 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.55■□□□□ 0.08
CLDN15P56746 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDN15P56746 RNA5SP415-201ENST00000517246 115 ntBASIC15.55■□□□□ 0.08
CLDN15P56746 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDN15P56746 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.55■□□□□ 0.08
CLDN15P56746 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.55■□□□□ 0.08
CLDN15P56746 AC145285.3-201ENST00000564603 959 ntBASIC15.55■□□□□ 0.08
CLDN15P56746 AC106730.1-201ENST00000566722 1090 ntBASIC15.55■□□□□ 0.08
CLDN15P56746 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDN15P56746 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.55■□□□□ 0.08
CLDN15P56746 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN15P56746 AC005332.8-201ENST00000622750 2735 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms