Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
WNT3AP56704 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
WNT3AP56704 MTDHP3-201ENST00000594186 672 ntBASIC17.51■□□□□ 0.39
WNT3AP56704 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
WNT3AP56704 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
WNT3AP56704 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
WNT3AP56704 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
WNT3AP56704 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
WNT3AP56704 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.51■□□□□ 0.39
WNT3AP56704 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.51■□□□□ 0.39
WNT3AP56704 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
WNT3AP56704 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
WNT3AP56704 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
WNT3AP56704 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
WNT3AP56704 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
WNT3AP56704 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
WNT3AP56704 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
WNT3AP56704 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
WNT3AP56704 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
WNT3AP56704 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
WNT3AP56704 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
WNT3AP56704 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.5■□□□□ 0.39
WNT3AP56704 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
WNT3AP56704 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.5■□□□□ 0.39
WNT3AP56704 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.5■□□□□ 0.39
WNT3AP56704 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
WNT3AP56704 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.5■□□□□ 0.39
WNT3AP56704 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.5■□□□□ 0.39
WNT3AP56704 BX005266.1-201ENST00000473402 457 ntBASIC17.5■□□□□ 0.39
WNT3AP56704 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.5■□□□□ 0.39
WNT3AP56704 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.5■□□□□ 0.39
WNT3AP56704 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.5■□□□□ 0.39
WNT3AP56704 LINC01711-201ENST00000598340 967 ntBASIC17.5■□□□□ 0.39
WNT3AP56704 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 REXO1L6P-202ENST00000619970 1078 ntBASIC17.5■□□□□ 0.39
WNT3AP56704 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.5■□□□□ 0.39
WNT3AP56704 AL355877.3-201ENST00000622820 899 ntBASIC17.5■□□□□ 0.39
WNT3AP56704 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.5■□□□□ 0.39
WNT3AP56704 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
WNT3AP56704 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
WNT3AP56704 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT3AP56704 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
WNT3AP56704 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
WNT3AP56704 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.49■□□□□ 0.39
WNT3AP56704 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.49■□□□□ 0.39
WNT3AP56704 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
WNT3AP56704 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 AKR1C7P-201ENST00000305623 895 ntBASIC17.49■□□□□ 0.39
WNT3AP56704 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.49■□□□□ 0.39
WNT3AP56704 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.49■□□□□ 0.39
WNT3AP56704 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.49■□□□□ 0.39
WNT3AP56704 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.49■□□□□ 0.39
WNT3AP56704 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
WNT3AP56704 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.49■□□□□ 0.39
WNT3AP56704 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
WNT3AP56704 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
WNT3AP56704 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.49■□□□□ 0.39
WNT3AP56704 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 AC097637.2-201ENST00000624096 1997 ntBASIC17.49■□□□□ 0.39
WNT3AP56704 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms