Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.08■□□□□ 0.64
PEX3P56589 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PEX3P56589 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.08■□□□□ 0.64
PEX3P56589 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PEX3P56589 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
PEX3P56589 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PEX3P56589 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.08■□□□□ 0.64
PEX3P56589 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.08■□□□□ 0.64
PEX3P56589 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
PEX3P56589 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.08■□□□□ 0.64
PEX3P56589 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PEX3P56589 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PEX3P56589 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.07■□□□□ 0.64
PEX3P56589 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PEX3P56589 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PEX3P56589 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.07■□□□□ 0.64
PEX3P56589 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
PEX3P56589 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PEX3P56589 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.07■□□□□ 0.64
PEX3P56589 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PEX3P56589 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PEX3P56589 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PEX3P56589 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
PEX3P56589 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.07■□□□□ 0.64
PEX3P56589 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.07■□□□□ 0.64
PEX3P56589 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.07■□□□□ 0.64
PEX3P56589 AC073621.1-201ENST00000392730 636 ntBASIC19.07■□□□□ 0.64
PEX3P56589 ELK2BP-201ENST00000415014 1224 ntBASIC19.07■□□□□ 0.64
PEX3P56589 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PEX3P56589 AC092910.1-201ENST00000482027 1129 ntBASIC19.07■□□□□ 0.64
PEX3P56589 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.07■□□□□ 0.64
PEX3P56589 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.07■□□□□ 0.64
PEX3P56589 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
PEX3P56589 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
PEX3P56589 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.07■□□□□ 0.64
PEX3P56589 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
PEX3P56589 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.07■□□□□ 0.64
PEX3P56589 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PEX3P56589 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PEX3P56589 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PEX3P56589 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
PEX3P56589 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PEX3P56589 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PEX3P56589 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PEX3P56589 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PEX3P56589 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PEX3P56589 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PEX3P56589 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PEX3P56589 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PEX3P56589 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PEX3P56589 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PEX3P56589 AC106820.2-201ENST00000563775 3264 ntBASIC19.06■□□□□ 0.64
PEX3P56589 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PEX3P56589 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PEX3P56589 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PEX3P56589 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PEX3P56589 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PEX3P56589 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.06■□□□□ 0.64
PEX3P56589 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PEX3P56589 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.06■□□□□ 0.64
PEX3P56589 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.06■□□□□ 0.64
PEX3P56589 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.06■□□□□ 0.64
PEX3P56589 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.06■□□□□ 0.64
PEX3P56589 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.06■□□□□ 0.64
PEX3P56589 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.06■□□□□ 0.64
PEX3P56589 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.06■□□□□ 0.64
PEX3P56589 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.06■□□□□ 0.64
PEX3P56589 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PEX3P56589 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.06■□□□□ 0.64
PEX3P56589 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PEX3P56589 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PEX3P56589 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PEX3P56589 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PEX3P56589 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PEX3P56589 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PEX3P56589 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PEX3P56589 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PEX3P56589 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PEX3P56589 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.05■□□□□ 0.64
PEX3P56589 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PEX3P56589 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PEX3P56589 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PEX3P56589 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
PEX3P56589 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PEX3P56589 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.05■□□□□ 0.64
PEX3P56589 LETM1P2-201ENST00000597330 2178 ntBASIC19.05■□□□□ 0.64
PEX3P56589 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PEX3P56589 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.05■□□□□ 0.64
PEX3P56589 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PEX3P56589 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PEX3P56589 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PEX3P56589 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PEX3P56589 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.05■□□□□ 0.64
PEX3P56589 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.05■□□□□ 0.64
PEX3P56589 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.05■□□□□ 0.64
PEX3P56589 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.05■□□□□ 0.64
PEX3P56589 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.05■□□□□ 0.64
PEX3P56589 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.05■□□□□ 0.64
PEX3P56589 AL356488.2-201ENST00000602755 427 ntBASIC19.05■□□□□ 0.64
PEX3P56589 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms