Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOC4P55056 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC4P55056 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC4P55056 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC12.7□□□□□ -0.38
APOC4P55056 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOC4P55056 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOC4P55056 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC12.7□□□□□ -0.38
APOC4P55056 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC4P55056 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.7□□□□□ -0.38
APOC4P55056 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
APOC4P55056 AC073621.1-201ENST00000392730 636 ntBASIC12.7□□□□□ -0.38
APOC4P55056 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.7□□□□□ -0.38
APOC4P55056 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.7□□□□□ -0.38
APOC4P55056 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC4P55056 MIR4751-201ENST00000578027 74 ntBASIC12.7□□□□□ -0.38
APOC4P55056 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC4P55056 AL805961.1-202ENST00000641562 540 ntBASIC12.7□□□□□ -0.38
APOC4P55056 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
APOC4P55056 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
APOC4P55056 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC12.7□□□□□ -0.38
APOC4P55056 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
APOC4P55056 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC12.7□□□□□ -0.38
APOC4P55056 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
APOC4P55056 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC4P55056 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
APOC4P55056 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC4P55056 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.7□□□□□ -0.38
APOC4P55056 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.7□□□□□ -0.38
APOC4P55056 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOC4P55056 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOC4P55056 NME9-203ENST00000383180 2133 ntTSL 2 BASIC12.7□□□□□ -0.38
APOC4P55056 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
APOC4P55056 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC4P55056 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC12.7□□□□□ -0.38
APOC4P55056 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC4P55056 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC4P55056 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC4P55056 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.69□□□□□ -0.38
APOC4P55056 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC12.69□□□□□ -0.38
APOC4P55056 PODN-203ENST00000395871 2744 ntTSL 5 BASIC12.69□□□□□ -0.38
APOC4P55056 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
APOC4P55056 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
APOC4P55056 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC12.69□□□□□ -0.38
APOC4P55056 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC4P55056 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC4P55056 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
APOC4P55056 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC12.69□□□□□ -0.38
APOC4P55056 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.69□□□□□ -0.38
APOC4P55056 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC4P55056 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC4P55056 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC4P55056 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.69□□□□□ -0.38
APOC4P55056 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC4P55056 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.69□□□□□ -0.38
APOC4P55056 AP002414.1-201ENST00000391405 1147 ntBASIC12.69□□□□□ -0.38
APOC4P55056 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
APOC4P55056 CRYGEP-201ENST00000412192 528 ntBASIC12.69□□□□□ -0.38
APOC4P55056 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.69□□□□□ -0.38
APOC4P55056 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.69□□□□□ -0.38
APOC4P55056 AC009947.1-201ENST00000444350 727 ntBASIC12.69□□□□□ -0.38
APOC4P55056 KRT18P3-201ENST00000451602 1288 ntBASIC12.69□□□□□ -0.38
APOC4P55056 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.69□□□□□ -0.38
APOC4P55056 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.69□□□□□ -0.38
APOC4P55056 POLD2P1-201ENST00000511220 997 ntBASIC12.69□□□□□ -0.38
APOC4P55056 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
APOC4P55056 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC12.69□□□□□ -0.38
APOC4P55056 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC12.69□□□□□ -0.38
APOC4P55056 AC034105.1-201ENST00000563488 319 ntBASIC12.69□□□□□ -0.38
APOC4P55056 AL353135.1-201ENST00000606729 504 ntBASIC12.69□□□□□ -0.38
APOC4P55056 AC008667.4-201ENST00000607370 168 ntBASIC12.69□□□□□ -0.38
APOC4P55056 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.69□□□□□ -0.38
APOC4P55056 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC4P55056 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC4P55056 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC12.69□□□□□ -0.38
APOC4P55056 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
APOC4P55056 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APOC4P55056 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC12.69□□□□□ -0.38
APOC4P55056 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC4P55056 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC12.69□□□□□ -0.38
APOC4P55056 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOC4P55056 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
APOC4P55056 AC006504.4-201ENST00000592118 1568 ntBASIC12.69□□□□□ -0.38
APOC4P55056 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC4P55056 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC4P55056 REXO1L11P-201ENST00000620964 1927 ntBASIC12.68□□□□□ -0.38
APOC4P55056 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.68□□□□□ -0.38
APOC4P55056 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC12.68□□□□□ -0.38
APOC4P55056 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
APOC4P55056 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC4P55056 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC12.68□□□□□ -0.38
APOC4P55056 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC12.68□□□□□ -0.38
APOC4P55056 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC4P55056 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC4P55056 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC12.68□□□□□ -0.38
APOC4P55056 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC4P55056 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOC4P55056 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
APOC4P55056 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOC4P55056 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.68□□□□□ -0.38
APOC4P55056 KRT18P13-201ENST00000400056 1290 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms