Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.13■□□□□ 0.97
PDE1AP54750 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
PDE1AP54750 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDE1AP54750 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE1AP54750 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE1AP54750 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE1AP54750 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE1AP54750 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE1AP54750 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDE1AP54750 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE1AP54750 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDE1AP54750 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDE1AP54750 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE1AP54750 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PDE1AP54750 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PDE1AP54750 LINC00982-205ENST00000420957 435 ntBASIC21.13■□□□□ 0.97
PDE1AP54750 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PDE1AP54750 FGFR3P6-201ENST00000457012 610 ntBASIC21.13■□□□□ 0.97
PDE1AP54750 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.13■□□□□ 0.97
PDE1AP54750 AC124947.2-201ENST00000547118 1133 ntBASIC21.13■□□□□ 0.97
PDE1AP54750 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.13■□□□□ 0.97
PDE1AP54750 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE1AP54750 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE1AP54750 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE1AP54750 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDE1AP54750 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE1AP54750 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE1AP54750 FRMD8P1-201ENST00000440433 1524 ntBASIC21.13■□□□□ 0.97
PDE1AP54750 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PDE1AP54750 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDE1AP54750 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDE1AP54750 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDE1AP54750 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE1AP54750 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE1AP54750 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE1AP54750 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PDE1AP54750 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE1AP54750 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE1AP54750 AC106886.4-201ENST00000623557 2502 ntBASIC21.12■□□□□ 0.97
PDE1AP54750 AL356309.3-201ENST00000624132 1934 ntBASIC21.12■□□□□ 0.97
PDE1AP54750 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE1AP54750 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE1AP54750 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE1AP54750 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE1AP54750 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.12■□□□□ 0.97
PDE1AP54750 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE1AP54750 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.12■□□□□ 0.97
PDE1AP54750 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.12■□□□□ 0.97
PDE1AP54750 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC21.12■□□□□ 0.97
PDE1AP54750 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.12■□□□□ 0.97
PDE1AP54750 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.12■□□□□ 0.97
PDE1AP54750 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.12■□□□□ 0.97
PDE1AP54750 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE1AP54750 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE1AP54750 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
PDE1AP54750 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDE1AP54750 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDE1AP54750 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDE1AP54750 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE1AP54750 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE1AP54750 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.12■□□□□ 0.97
PDE1AP54750 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDE1AP54750 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.12■□□□□ 0.97
PDE1AP54750 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDE1AP54750 AC011676.5-201ENST00000624864 2660 ntBASIC21.12■□□□□ 0.97
PDE1AP54750 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDE1AP54750 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE1AP54750 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDE1AP54750 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.11■□□□□ 0.97
PDE1AP54750 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE1AP54750 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDE1AP54750 AC005915.1-201ENST00000624912 2018 ntBASIC21.11■□□□□ 0.97
PDE1AP54750 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC21.11■□□□□ 0.97
PDE1AP54750 AC105020.1-201ENST00000435356 2205 ntBASIC21.11■□□□□ 0.97
PDE1AP54750 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.11■□□□□ 0.97
PDE1AP54750 UNC93B7-201ENST00000509439 705 ntBASIC21.11■□□□□ 0.97
PDE1AP54750 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.11■□□□□ 0.97
PDE1AP54750 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.11■□□□□ 0.97
PDE1AP54750 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE1AP54750 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
PDE1AP54750 AF238378.1-201ENST00000526806 358 ntBASIC21.11■□□□□ 0.97
PDE1AP54750 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDE1AP54750 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDE1AP54750 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PDE1AP54750 AL139288.1-201ENST00000623748 933 ntBASIC21.11■□□□□ 0.97
PDE1AP54750 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PDE1AP54750 GPR89P-201ENST00000407924 1495 ntBASIC21.11■□□□□ 0.97
PDE1AP54750 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDE1AP54750 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE1AP54750 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC21.11■□□□□ 0.97
PDE1AP54750 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE1AP54750 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC21.11■□□□□ 0.97
PDE1AP54750 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDE1AP54750 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDE1AP54750 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDE1AP54750 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PDE1AP54750 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDE1AP54750 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC21.1■□□□□ 0.97
PDE1AP54750 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC21.1■□□□□ 0.97
PDE1AP54750 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms