Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AC087499.1-201ENST00000418141 1075 ntBASIC15.81■□□□□ 0.12
HMGA2P52926 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGA2P52926 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.81■□□□□ 0.12
HMGA2P52926 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGA2P52926 AP002490.2-201ENST00000524791 560 ntBASIC15.81■□□□□ 0.12
HMGA2P52926 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.81■□□□□ 0.12
HMGA2P52926 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.81■□□□□ 0.12
HMGA2P52926 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.81■□□□□ 0.12
HMGA2P52926 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HMGA2P52926 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGA2P52926 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.81■□□□□ 0.12
HMGA2P52926 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.81■□□□□ 0.12
HMGA2P52926 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.81■□□□□ 0.12
HMGA2P52926 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.81■□□□□ 0.12
HMGA2P52926 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.81■□□□□ 0.12
HMGA2P52926 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGA2P52926 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGA2P52926 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGA2P52926 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGA2P52926 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.8■□□□□ 0.12
HMGA2P52926 PCDHB17P-201ENST00000539533 2393 ntBASIC15.8■□□□□ 0.12
HMGA2P52926 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.8■□□□□ 0.12
HMGA2P52926 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.8■□□□□ 0.12
HMGA2P52926 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.8■□□□□ 0.12
HMGA2P52926 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HMGA2P52926 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.8■□□□□ 0.12
HMGA2P52926 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
HMGA2P52926 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 AC073508.3-201ENST00000619697 1419 ntBASIC15.8■□□□□ 0.12
HMGA2P52926 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.8■□□□□ 0.12
HMGA2P52926 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
HMGA2P52926 FAM220CP-201ENST00000395253 831 ntBASIC15.8■□□□□ 0.12
HMGA2P52926 TSPY5P-201ENST00000426936 936 ntBASIC15.8■□□□□ 0.12
HMGA2P52926 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.8■□□□□ 0.12
HMGA2P52926 KRT18P38-201ENST00000449496 1282 ntBASIC15.8■□□□□ 0.12
HMGA2P52926 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.8■□□□□ 0.12
HMGA2P52926 GUSBP12-201ENST00000513727 720 ntBASIC15.8■□□□□ 0.12
HMGA2P52926 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.8■□□□□ 0.12
HMGA2P52926 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.8■□□□□ 0.12
HMGA2P52926 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.8■□□□□ 0.12
HMGA2P52926 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
HMGA2P52926 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
HMGA2P52926 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.8■□□□□ 0.12
HMGA2P52926 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.8■□□□□ 0.12
HMGA2P52926 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.8■□□□□ 0.12
HMGA2P52926 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HMGA2P52926 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
HMGA2P52926 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGA2P52926 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.79■□□□□ 0.12
HMGA2P52926 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMGA2P52926 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGA2P52926 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGA2P52926 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMGA2P52926 AC009336.1-201ENST00000608941 1553 ntBASIC15.79■□□□□ 0.12
HMGA2P52926 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGA2P52926 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMGA2P52926 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGA2P52926 AL645728.1-201ENST00000366221 2101 ntBASIC15.79■□□□□ 0.12
HMGA2P52926 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HMGA2P52926 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
HMGA2P52926 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGA2P52926 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGA2P52926 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.79■□□□□ 0.12
HMGA2P52926 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMGA2P52926 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGA2P52926 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGA2P52926 AC117947.1-201ENST00000427448 529 ntBASIC15.79■□□□□ 0.12
HMGA2P52926 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMGA2P52926 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.79■□□□□ 0.12
HMGA2P52926 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
HMGA2P52926 VENTXP5-201ENST00000523979 775 ntBASIC15.79■□□□□ 0.12
HMGA2P52926 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HMGA2P52926 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.79■□□□□ 0.12
HMGA2P52926 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HMGA2P52926 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HMGA2P52926 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.79■□□□□ 0.12
HMGA2P52926 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HMGA2P52926 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HMGA2P52926 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms