Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MRE11P49959 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MRE11P49959 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 AC092171.3-201ENST00000610122 2651 ntBASIC20.23■□□□□ 0.83
MRE11P49959 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.23■□□□□ 0.83
MRE11P49959 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 AC024909.3-201ENST00000611513 2257 ntBASIC20.23■□□□□ 0.83
MRE11P49959 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.23■□□□□ 0.83
MRE11P49959 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.23■□□□□ 0.83
MRE11P49959 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.23■□□□□ 0.83
MRE11P49959 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.23■□□□□ 0.83
MRE11P49959 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 KRT8P10-201ENST00000450021 1447 ntBASIC20.23■□□□□ 0.83
MRE11P49959 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.23■□□□□ 0.83
MRE11P49959 AC116562.2-201ENST00000507042 360 ntBASIC20.23■□□□□ 0.83
MRE11P49959 C2orf69P3-201ENST00000565542 1120 ntBASIC20.23■□□□□ 0.83
MRE11P49959 RN7SL510P-201ENST00000581311 263 ntBASIC20.23■□□□□ 0.83
MRE11P49959 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 AC069148.1-201ENST00000608741 768 ntBASIC20.23■□□□□ 0.83
MRE11P49959 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.23■□□□□ 0.83
MRE11P49959 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC20.23■□□□□ 0.83
MRE11P49959 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 AC034236.2-201ENST00000606662 1610 ntBASIC20.23■□□□□ 0.83
MRE11P49959 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRE11P49959 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MRE11P49959 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
MRE11P49959 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.22■□□□□ 0.83
MRE11P49959 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MRE11P49959 AL163051.1-201ENST00000569214 1512 ntBASIC20.22■□□□□ 0.83
MRE11P49959 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MRE11P49959 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRE11P49959 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MRE11P49959 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRE11P49959 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.22■□□□□ 0.83
MRE11P49959 AC079328.2-201ENST00000561241 3354 ntBASIC20.22■□□□□ 0.83
MRE11P49959 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
MRE11P49959 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRE11P49959 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
MRE11P49959 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
MRE11P49959 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
MRE11P49959 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.22■□□□□ 0.83
MRE11P49959 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
MRE11P49959 AP002982.1-201ENST00000492365 877 ntBASIC20.22■□□□□ 0.83
MRE11P49959 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.22■□□□□ 0.83
MRE11P49959 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.22■□□□□ 0.83
MRE11P49959 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MRE11P49959 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.22■□□□□ 0.83
MRE11P49959 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRE11P49959 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.22■□□□□ 0.83
MRE11P49959 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MRE11P49959 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRE11P49959 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
MRE11P49959 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRE11P49959 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
MRE11P49959 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRE11P49959 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRE11P49959 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRE11P49959 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MRE11P49959 RNF216P1-203ENST00000404404 2427 ntBASIC20.22■□□□□ 0.83
MRE11P49959 AL136379.1-201ENST00000623471 2642 ntBASIC20.22■□□□□ 0.83
MRE11P49959 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRE11P49959 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC20.22■□□□□ 0.83
MRE11P49959 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.21■□□□□ 0.83
MRE11P49959 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC20.21■□□□□ 0.83
MRE11P49959 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRE11P49959 REXO1L11P-201ENST00000620964 1927 ntBASIC20.21■□□□□ 0.83
MRE11P49959 FER1L4-210ENST00000615531 5998 ntBASIC20.21■□□□□ 0.83
MRE11P49959 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRE11P49959 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
MRE11P49959 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRE11P49959 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRE11P49959 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MRE11P49959 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRE11P49959 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRE11P49959 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
MRE11P49959 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRE11P49959 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
MRE11P49959 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRE11P49959 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms