Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSR1P43307 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.48■□□□□ 0.55
SSR1P43307 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
SSR1P43307 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SSR1P43307 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SSR1P43307 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSR1P43307 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSR1P43307 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSR1P43307 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSR1P43307 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSR1P43307 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSR1P43307 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
SSR1P43307 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSR1P43307 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSR1P43307 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.47■□□□□ 0.55
SSR1P43307 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SSR1P43307 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.47■□□□□ 0.55
SSR1P43307 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.47■□□□□ 0.55
SSR1P43307 LYSMD4-203ENST00000378904 2122 ntBASIC18.47■□□□□ 0.55
SSR1P43307 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSR1P43307 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSR1P43307 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSR1P43307 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSR1P43307 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSR1P43307 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSR1P43307 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
SSR1P43307 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSR1P43307 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSR1P43307 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SSR1P43307 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSR1P43307 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SSR1P43307 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.46■□□□□ 0.55
SSR1P43307 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SSR1P43307 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSR1P43307 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SSR1P43307 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.46■□□□□ 0.55
SSR1P43307 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SSR1P43307 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSR1P43307 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.46■□□□□ 0.55
SSR1P43307 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSR1P43307 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.46■□□□□ 0.55
SSR1P43307 AL596257.1-201ENST00000641463 2694 ntBASIC18.46■□□□□ 0.55
SSR1P43307 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSR1P43307 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSR1P43307 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSR1P43307 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSR1P43307 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSR1P43307 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSR1P43307 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
SSR1P43307 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSR1P43307 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.46■□□□□ 0.55
SSR1P43307 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.46■□□□□ 0.55
SSR1P43307 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.46■□□□□ 0.55
SSR1P43307 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.46■□□□□ 0.55
SSR1P43307 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.46■□□□□ 0.55
SSR1P43307 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSR1P43307 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSR1P43307 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSR1P43307 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSR1P43307 AC010460.3-201ENST00000511359 1579 ntBASIC18.46■□□□□ 0.55
SSR1P43307 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSR1P43307 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
SSR1P43307 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
SSR1P43307 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSR1P43307 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSR1P43307 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SSR1P43307 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.45■□□□□ 0.54
SSR1P43307 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSR1P43307 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SSR1P43307 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSR1P43307 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSR1P43307 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SSR1P43307 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSR1P43307 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSR1P43307 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSR1P43307 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SSR1P43307 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.45■□□□□ 0.54
SSR1P43307 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSR1P43307 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.45■□□□□ 0.54
SSR1P43307 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.45■□□□□ 0.54
SSR1P43307 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SSR1P43307 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.45■□□□□ 0.54
SSR1P43307 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.45■□□□□ 0.54
SSR1P43307 AC011840.4-201ENST00000578471 627 ntBASIC18.45■□□□□ 0.54
SSR1P43307 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.45■□□□□ 0.54
SSR1P43307 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.45■□□□□ 0.54
SSR1P43307 AL592071.1-201ENST00000611956 408 ntBASIC18.45■□□□□ 0.54
SSR1P43307 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.45■□□□□ 0.54
SSR1P43307 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.45■□□□□ 0.54
SSR1P43307 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSR1P43307 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SSR1P43307 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SSR1P43307 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SSR1P43307 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SSR1P43307 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSR1P43307 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.45■□□□□ 0.54
SSR1P43307 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.45■□□□□ 0.54
SSR1P43307 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.45■□□□□ 0.54
SSR1P43307 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SSR1P43307 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms