Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 FAM197Y3-203ENST00000618346 717 ntBASIC17.74■□□□□ 0.43
SLC6A4P31645 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A4P31645 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A4P31645 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A4P31645 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A4P31645 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC6A4P31645 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC6A4P31645 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC6A4P31645 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC6A4P31645 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A4P31645 CROCCP2-202ENST00000412962 2773 ntBASIC17.74■□□□□ 0.43
SLC6A4P31645 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A4P31645 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SLC6A4P31645 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A4P31645 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A4P31645 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SLC6A4P31645 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A4P31645 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A4P31645 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A4P31645 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A4P31645 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC6A4P31645 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SLC6A4P31645 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A4P31645 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC6A4P31645 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A4P31645 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A4P31645 KRT18P2-201ENST00000447938 1258 ntBASIC17.73■□□□□ 0.43
SLC6A4P31645 KRT18P3-201ENST00000451602 1288 ntBASIC17.73■□□□□ 0.43
SLC6A4P31645 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
SLC6A4P31645 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.73■□□□□ 0.43
SLC6A4P31645 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC6A4P31645 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC6A4P31645 OR7E47P-204ENST00000575924 449 ntBASIC17.73■□□□□ 0.43
SLC6A4P31645 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC6A4P31645 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.73■□□□□ 0.43
SLC6A4P31645 AC064836.3-201ENST00000607928 673 ntBASIC17.73■□□□□ 0.43
SLC6A4P31645 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SLC6A4P31645 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC6A4P31645 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC6A4P31645 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC6A4P31645 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC6A4P31645 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SLC6A4P31645 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A4P31645 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A4P31645 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A4P31645 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A4P31645 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A4P31645 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A4P31645 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A4P31645 AC016396.2-201ENST00000562575 1417 ntBASIC17.72■□□□□ 0.43
SLC6A4P31645 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A4P31645 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A4P31645 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A4P31645 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A4P31645 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SLC6A4P31645 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC6A4P31645 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A4P31645 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC6A4P31645 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SLC6A4P31645 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A4P31645 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A4P31645 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A4P31645 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC6A4P31645 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A4P31645 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A4P31645 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
SLC6A4P31645 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.72■□□□□ 0.43
SLC6A4P31645 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC6A4P31645 AL591424.1-201ENST00000442569 1213 ntBASIC17.72■□□□□ 0.43
SLC6A4P31645 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC6A4P31645 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC6A4P31645 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A4P31645 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SLC6A4P31645 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A4P31645 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A4P31645 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A4P31645 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SLC6A4P31645 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SLC6A4P31645 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A4P31645 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A4P31645 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A4P31645 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A4P31645 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC6A4P31645 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
SLC6A4P31645 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A4P31645 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SLC6A4P31645 PMS2P7-201ENST00000506558 1336 ntBASIC17.72■□□□□ 0.43
SLC6A4P31645 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A4P31645 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A4P31645 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A4P31645 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A4P31645 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC6A4P31645 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A4P31645 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SLC6A4P31645 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A4P31645 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SLC6A4P31645 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A4P31645 MRPL20P1-201ENST00000400819 433 ntBASIC17.71■□□□□ 0.43
SLC6A4P31645 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SLC6A4P31645 CRYGEP-201ENST00000412192 528 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms