Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTGFP29279 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTGFP29279 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.31■□□□□ 0.68
CTGFP29279 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CTGFP29279 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTGFP29279 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CTGFP29279 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTGFP29279 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTGFP29279 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTGFP29279 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.3■□□□□ 0.68
CTGFP29279 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTGFP29279 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTGFP29279 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.3■□□□□ 0.68
CTGFP29279 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTGFP29279 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTGFP29279 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTGFP29279 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTGFP29279 RNU1-129P-201ENST00000384064 167 ntBASIC19.3■□□□□ 0.68
CTGFP29279 KRT17P7-201ENST00000451704 1104 ntBASIC19.3■□□□□ 0.68
CTGFP29279 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTGFP29279 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.3■□□□□ 0.68
CTGFP29279 IGHV3-71-201ENST00000523324 359 ntBASIC19.3■□□□□ 0.68
CTGFP29279 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.3■□□□□ 0.68
CTGFP29279 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.3■□□□□ 0.68
CTGFP29279 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTGFP29279 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.3■□□□□ 0.68
CTGFP29279 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.3■□□□□ 0.68
CTGFP29279 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CTGFP29279 U1.21-201ENST00000580816 167 ntBASIC19.3■□□□□ 0.68
CTGFP29279 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.3■□□□□ 0.68
CTGFP29279 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.3■□□□□ 0.68
CTGFP29279 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.3■□□□□ 0.68
CTGFP29279 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.3■□□□□ 0.68
CTGFP29279 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTGFP29279 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTGFP29279 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.3■□□□□ 0.68
CTGFP29279 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.3■□□□□ 0.68
CTGFP29279 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CTGFP29279 AC016027.1-202ENST00000607927 1699 ntBASIC19.3■□□□□ 0.68
CTGFP29279 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTGFP29279 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTGFP29279 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTGFP29279 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CTGFP29279 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CTGFP29279 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTGFP29279 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTGFP29279 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTGFP29279 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.29■□□□□ 0.68
CTGFP29279 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CTGFP29279 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTGFP29279 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.29■□□□□ 0.68
CTGFP29279 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.29■□□□□ 0.68
CTGFP29279 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.29■□□□□ 0.68
CTGFP29279 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.29■□□□□ 0.68
CTGFP29279 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.29■□□□□ 0.68
CTGFP29279 AC009407.1-201ENST00000568958 598 ntBASIC19.29■□□□□ 0.68
CTGFP29279 TP53TG3HP-202ENST00000569755 579 ntBASIC19.29■□□□□ 0.68
CTGFP29279 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTGFP29279 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.29■□□□□ 0.68
CTGFP29279 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.29■□□□□ 0.68
CTGFP29279 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.29■□□□□ 0.68
CTGFP29279 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CTGFP29279 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTGFP29279 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTGFP29279 SLC22A20-204ENST00000530038 1673 ntBASIC19.29■□□□□ 0.68
CTGFP29279 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.29■□□□□ 0.68
CTGFP29279 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTGFP29279 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CTGFP29279 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTGFP29279 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTGFP29279 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CTGFP29279 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.29■□□□□ 0.68
CTGFP29279 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTGFP29279 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTGFP29279 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CTGFP29279 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.28■□□□□ 0.68
CTGFP29279 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTGFP29279 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.28■□□□□ 0.68
CTGFP29279 AC142381.1-201ENST00000426099 345 ntBASIC19.28■□□□□ 0.68
CTGFP29279 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.28■□□□□ 0.68
CTGFP29279 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTGFP29279 AC009477.1-201ENST00000452936 217 ntBASIC19.28■□□□□ 0.68
CTGFP29279 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.28■□□□□ 0.68
CTGFP29279 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.28■□□□□ 0.68
CTGFP29279 API5-211ENST00000534695 560 ntTSL 5 BASIC19.28■□□□□ 0.68
CTGFP29279 AC008738.7-201ENST00000609744 511 ntBASIC19.28■□□□□ 0.68
CTGFP29279 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.28■□□□□ 0.68
CTGFP29279 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTGFP29279 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTGFP29279 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CTGFP29279 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTGFP29279 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.27■□□□□ 0.68
CTGFP29279 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.27■□□□□ 0.68
CTGFP29279 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CTGFP29279 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CTGFP29279 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.27■□□□□ 0.68
CTGFP29279 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.27■□□□□ 0.68
CTGFP29279 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.27■□□□□ 0.68
CTGFP29279 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTGFP29279 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms