Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CHMLP26374 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMLP26374 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHMLP26374 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMLP26374 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHMLP26374 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMLP26374 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CHMLP26374 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMLP26374 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMLP26374 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMLP26374 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHMLP26374 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.87■□□□□ 0.93
CHMLP26374 ACTG1P4-201ENST00000425123 1122 ntBASIC20.87■□□□□ 0.93
CHMLP26374 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.87■□□□□ 0.93
CHMLP26374 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.87■□□□□ 0.93
CHMLP26374 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.87■□□□□ 0.93
CHMLP26374 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHMLP26374 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.87■□□□□ 0.93
CHMLP26374 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.87■□□□□ 0.93
CHMLP26374 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CHMLP26374 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.87■□□□□ 0.93
CHMLP26374 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMLP26374 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.87■□□□□ 0.93
CHMLP26374 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
CHMLP26374 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHMLP26374 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.87■□□□□ 0.93
CHMLP26374 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHMLP26374 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHMLP26374 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CHMLP26374 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.86■□□□□ 0.93
CHMLP26374 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CHMLP26374 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CHMLP26374 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 BCL2-203ENST00000589955 5011 ntBASIC20.86■□□□□ 0.93
CHMLP26374 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 AC084018.2-201ENST00000613093 2607 ntBASIC20.86■□□□□ 0.93
CHMLP26374 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CHMLP26374 KRT18P31-201ENST00000506277 1292 ntBASIC20.86■□□□□ 0.93
CHMLP26374 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.86■□□□□ 0.93
CHMLP26374 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.86■□□□□ 0.93
CHMLP26374 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.86■□□□□ 0.93
CHMLP26374 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.86■□□□□ 0.93
CHMLP26374 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.86■□□□□ 0.93
CHMLP26374 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 AC097637.2-201ENST00000624096 1997 ntBASIC20.86■□□□□ 0.93
CHMLP26374 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 GPR89P-201ENST00000407924 1495 ntBASIC20.86■□□□□ 0.93
CHMLP26374 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CHMLP26374 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMLP26374 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CHMLP26374 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMLP26374 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHMLP26374 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CHMLP26374 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMLP26374 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMLP26374 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CHMLP26374 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHMLP26374 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.85■□□□□ 0.93
CHMLP26374 TSPY19P-201ENST00000418461 509 ntBASIC20.85■□□□□ 0.93
CHMLP26374 TSPY18P-201ENST00000441642 509 ntBASIC20.85■□□□□ 0.93
CHMLP26374 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
CHMLP26374 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.85■□□□□ 0.93
CHMLP26374 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMLP26374 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMLP26374 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMLP26374 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMLP26374 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHMLP26374 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CHMLP26374 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CHMLP26374 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CHMLP26374 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.84■□□□□ 0.93
CHMLP26374 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.84■□□□□ 0.93
CHMLP26374 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.84■□□□□ 0.93
CHMLP26374 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
CHMLP26374 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMLP26374 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CHMLP26374 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.84■□□□□ 0.93
CHMLP26374 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.84■□□□□ 0.93
CHMLP26374 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.84■□□□□ 0.93
CHMLP26374 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMLP26374 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMLP26374 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms