Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH3P22223 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CDH3P22223 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH3P22223 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
CDH3P22223 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CDH3P22223 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH3P22223 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.03■□□□□ 0.32
CDH3P22223 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.03■□□□□ 0.32
CDH3P22223 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH3P22223 SCARNA2-201ENST00000458748 420 ntBASIC17.03■□□□□ 0.32
CDH3P22223 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.03■□□□□ 0.32
CDH3P22223 AL662844.1-201ENST00000546340 181 ntBASIC17.03■□□□□ 0.32
CDH3P22223 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH3P22223 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.03■□□□□ 0.32
CDH3P22223 AC064862.7-201ENST00000604520 867 ntBASIC17.03■□□□□ 0.32
CDH3P22223 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH3P22223 TP73-AS1-207ENST00000624167 988 ntBASIC17.03■□□□□ 0.32
CDH3P22223 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH3P22223 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH3P22223 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH3P22223 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH3P22223 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH3P22223 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH3P22223 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDH3P22223 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH3P22223 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH3P22223 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH3P22223 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH3P22223 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDH3P22223 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH3P22223 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH3P22223 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH3P22223 AL596257.1-201ENST00000641463 2694 ntBASIC17.03■□□□□ 0.32
CDH3P22223 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CDH3P22223 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.02■□□□□ 0.32
CDH3P22223 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH3P22223 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH3P22223 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH3P22223 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH3P22223 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH3P22223 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH3P22223 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH3P22223 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.02■□□□□ 0.32
CDH3P22223 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH3P22223 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH3P22223 COX5BP2-201ENST00000392354 334 ntBASIC17.02■□□□□ 0.32
CDH3P22223 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH3P22223 AC103564.2-201ENST00000432853 1299 ntBASIC17.02■□□□□ 0.32
CDH3P22223 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH3P22223 FGFR3P6-201ENST00000457012 610 ntBASIC17.02■□□□□ 0.32
CDH3P22223 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH3P22223 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH3P22223 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH3P22223 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH3P22223 AC138028.4-201ENST00000564984 1845 ntBASIC17.02■□□□□ 0.31
CDH3P22223 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH3P22223 AC009949.1-201ENST00000623048 1830 ntBASIC17.02■□□□□ 0.31
CDH3P22223 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH3P22223 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CDH3P22223 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH3P22223 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.02■□□□□ 0.31
CDH3P22223 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH3P22223 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CDH3P22223 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH3P22223 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH3P22223 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDH3P22223 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.02■□□□□ 0.31
CDH3P22223 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CDH3P22223 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CDH3P22223 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH3P22223 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH3P22223 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH3P22223 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CDH3P22223 GNAS-203ENST00000306120 1878 ntBASIC17.01■□□□□ 0.31
CDH3P22223 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH3P22223 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CDH3P22223 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH3P22223 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH3P22223 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH3P22223 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH3P22223 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH3P22223 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH3P22223 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH3P22223 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH3P22223 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CDH3P22223 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH3P22223 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH3P22223 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH3P22223 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH3P22223 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH3P22223 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.01■□□□□ 0.31
CDH3P22223 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH3P22223 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH3P22223 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH3P22223 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH3P22223 AF186996.4-201ENST00000467186 377 ntBASIC17.01■□□□□ 0.31
CDH3P22223 AC073648.2-201ENST00000510116 352 ntBASIC17.01■□□□□ 0.31
CDH3P22223 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH3P22223 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH3P22223 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms