Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LMNB1P20700 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
LMNB1P20700 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.85■□□□□ 0.93
LMNB1P20700 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
LMNB1P20700 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LMNB1P20700 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.85■□□□□ 0.93
LMNB1P20700 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMNB1P20700 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMNB1P20700 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMNB1P20700 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMNB1P20700 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LMNB1P20700 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMNB1P20700 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.84■□□□□ 0.93
LMNB1P20700 AL135999.2-201ENST00000622438 1686 ntBASIC20.84■□□□□ 0.93
LMNB1P20700 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMNB1P20700 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
LMNB1P20700 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
LMNB1P20700 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.84■□□□□ 0.93
LMNB1P20700 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMNB1P20700 HILS1-202ENST00000545329 423 ntBASIC20.84■□□□□ 0.93
LMNB1P20700 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC20.84■□□□□ 0.93
LMNB1P20700 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.84■□□□□ 0.93
LMNB1P20700 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.84■□□□□ 0.93
LMNB1P20700 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMNB1P20700 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMNB1P20700 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMNB1P20700 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.84■□□□□ 0.93
LMNB1P20700 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LMNB1P20700 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMNB1P20700 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMNB1P20700 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.84■□□□□ 0.93
LMNB1P20700 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LMNB1P20700 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LMNB1P20700 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
LMNB1P20700 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LMNB1P20700 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LMNB1P20700 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.83■□□□□ 0.93
LMNB1P20700 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LMNB1P20700 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LMNB1P20700 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.83■□□□□ 0.93
LMNB1P20700 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LMNB1P20700 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
LMNB1P20700 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC20.83■□□□□ 0.93
LMNB1P20700 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.83■□□□□ 0.93
LMNB1P20700 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.83■□□□□ 0.93
LMNB1P20700 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.83■□□□□ 0.93
LMNB1P20700 AP000842.3-202ENST00000569238 1080 ntBASIC20.83■□□□□ 0.93
LMNB1P20700 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
LMNB1P20700 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.83■□□□□ 0.93
LMNB1P20700 AL606495.2-201ENST00000605867 535 ntBASIC20.83■□□□□ 0.93
LMNB1P20700 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LMNB1P20700 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LMNB1P20700 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LMNB1P20700 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
LMNB1P20700 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.83■□□□□ 0.92
LMNB1P20700 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LMNB1P20700 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LMNB1P20700 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LMNB1P20700 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LMNB1P20700 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.83■□□□□ 0.92
LMNB1P20700 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LMNB1P20700 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
LMNB1P20700 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LMNB1P20700 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LMNB1P20700 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LMNB1P20700 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.82■□□□□ 0.92
LMNB1P20700 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
LMNB1P20700 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LMNB1P20700 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
LMNB1P20700 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LMNB1P20700 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.82■□□□□ 0.92
LMNB1P20700 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.82■□□□□ 0.92
LMNB1P20700 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.82■□□□□ 0.92
LMNB1P20700 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.82■□□□□ 0.92
LMNB1P20700 TP53TG3HP-202ENST00000569755 579 ntBASIC20.82■□□□□ 0.92
LMNB1P20700 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.82■□□□□ 0.92
LMNB1P20700 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
LMNB1P20700 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.82■□□□□ 0.92
LMNB1P20700 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LMNB1P20700 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.82■□□□□ 0.92
LMNB1P20700 AC008267.7-201ENST00000624570 1194 ntBASIC20.82■□□□□ 0.92
LMNB1P20700 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.82■□□□□ 0.92
LMNB1P20700 AL096828.2-201ENST00000567259 1965 ntBASIC20.82■□□□□ 0.92
LMNB1P20700 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LMNB1P20700 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
LMNB1P20700 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LMNB1P20700 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.81■□□□□ 0.92
LMNB1P20700 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LMNB1P20700 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LMNB1P20700 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LMNB1P20700 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
LMNB1P20700 MIR346-201ENST00000362234 95 ntBASIC20.81■□□□□ 0.92
LMNB1P20700 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LMNB1P20700 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.81■□□□□ 0.92
LMNB1P20700 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.81■□□□□ 0.92
LMNB1P20700 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC20.81■□□□□ 0.92
LMNB1P20700 AC109635.5-201ENST00000533593 962 ntBASIC20.81■□□□□ 0.92
LMNB1P20700 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.81■□□□□ 0.92
LMNB1P20700 AC010336.2-201ENST00000564226 506 ntBASIC20.81■□□□□ 0.92
LMNB1P20700 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms